Gene detail information of Glyur000119s00012139 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32450.1 | 3.00E-106 | nitrate transporter 1.5 |
| NR | ABD32535.1 | 0 | TGF-beta receptor, type I/II extracellular region [Medicago truncatula] |
| COG | YP_008149431.1 | 4.00E-15 | hypothetical protein SCE1572_14985 [Sorangium cellulosum So0157-2] |
| Swissprot | tr|Q8GXN2|PTR47_ARATH | 3.00E-142 | Protein NRT1/ PTR FAMILY 7.2 |
| trEMBL | tr|Q2HUR9|Q2HUR9_MEDTR | 0 | TGF-beta receptor, type I/II extracellular region {ECO:0000313|EMBL:ABD32535.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00119 | 24758 | 27617 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000119s00012139.1 | PF00854.16 | PTR2 | 105 | 284 | 3.80E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.100 |
| SRR1783600 | control | 0.081 |
| SRR1783602 | moderate drought stress | 0.733 |
| SRR1811619 | moderate drought stress | 0.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.050 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.003 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.660 |
| SRR2868004 | Drought Stress (root) | 10.064 |
| SRR2967015 | Control (root) | 15.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.581 |
| SRR9715740 | Leaf | 0.247 |
| SRR9715741 | Leaf | 0.151 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.168 |
| SRR8749028 | MeJA induced 9h | 0.999 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.207 |
| SRR8749031 | Uninduced | 0.134 |
| SRR8749032 | Uninduced | 0.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.239 |
| SRR8400027 | Control - Root | 6.125 |