Gene detail information of Glyur000118s00009677 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05800.2 | 2.00E-16 | |
| NR | XP_004499242.1 | 0 | PREDICTED: uncharacterized protein LOC101511337 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7MP11|K7MP11_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G37671.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00118 | 299885 | 303307 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000118s00009677.1 | PF12776.2 | Myb_DNA-bind_3 | 17 | 97 | 5.80E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.456 |
| SRR1783600 | control | 5.839 |
| SRR1783602 | moderate drought stress | 2.916 |
| SRR1811619 | moderate drought stress | 2.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.205 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.154 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.038 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.971 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.203 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.111 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.290 |
| SRR2868004 | Drought Stress (root) | 11.053 |
| SRR2967015 | Control (root) | 11.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.979 |
| SRR9715740 | Leaf | 7.801 |
| SRR9715741 | Leaf | 9.148 |
| SRR9715739 | Root | 1.915 |
| SRR9715742 | Root | 6.816 |
| SRR9715743 | Root | 5.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.198 |
| SRR8749028 | MeJA induced 9h | 21.814 |
| SRR8749029 | MeJA induced 9h | 25.038 |
| SRR8749030 | Uninduced | 13.990 |
| SRR8749031 | Uninduced | 12.808 |
| SRR8749032 | Uninduced | 15.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.128 |
| SRR8400027 | Control - Root | 11.048 |