Gene detail

Gene detail information of Glyur000118s00009676

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G75690.1	9.00E-45	DnaJ/Hsp40 cysteine-rich domain superfamily protein
NR	XP_003589460.1	1.16E-74	hypothetical protein MTR_1g024840 [Medicago truncatula]
Swissprot	tr\|Q8GSJ6\|LQY1_ARATH	5.00E-58	Protein disulfide-isomerase LQY1 (Precursor)
trEMBL	tr\|G7I748\|G7I748_MEDTR	4.00E-75	Protein disulfide-isomerase LQY1 {ECO:0000313\|EMBL:AES59711.1}

Sequence

Transcript Sequence

>Glyur000118s00009676.1
GTCGTGACATCCCCGCCACTGTTTGGATGCTATGTTGGGAGTTTCACTGCCTCACAACACAATCACATCACCACCTCTCTCATTCTTAACAACGATTCCTTTTCCCAGTTCAGTTCAGATATACTGGGGTTGAAGCGAGTGAGAAATGACACTAGTTCCTTCCCTTTCTCTCCCTCACTTGCATTCCTCTTTTCTTTCTTCTTCCCCTCTAAAATCCTTATCCTCCTTTCCCTCTCCCAGAAATAGAATTCAACAACTAAAACCCACTTCTTATCCACGTATCAGAGCTCTTGAACTTGATCAAAACACGGTAGTGGCTATAAGTGTTGGTGTCCTGAGTGTGGCTGTTGGGATTGGCATTCCAGTGTTCTATGAAAACCAAATTGATAATGCTGTGAAGTGTTTTAATTACTTTTTACCTCTAAGCGAGACAACACGCAGGCCTGTTTCCCTTGCAATGGATCTGGCGCTCGTAAAGAAATGCAGATTTTGTTTGGGAACTGGCAATGTGACAGTTGAACTTGGTGGGGGTGAAAAGGAGGTCTCTCGATGCATAAATTGTGAAGGTGCTGGATCATTGACATGCACAACTTGTCAAGGATCTGGGATTCAACCTCGTTACCTTGACCGTAGAGAATTCAAAGATGATGACTGAGACAAGCTAAGATTACGTGGCGCCGATTTTGGATTTAATCACGATGTTAATGTACTCATTTAATTTCTTTGGTCTGTGTACACACCTAATACAACTGTCAAAATCATGTTGATAATTTCATTTGGTTTACAATTGAACCAGTGATATTAGGCCACTCCCTTTCGTGACCCATCTCTGTAAAATTTTGGCGTTTGTTGACACTATTTTTATTTAATGTCCTGCTACCAGTACTAGAAGCATAATAAGCCATTCTAGTAGTGGGTTAAGATGAGGGGTTAGCATAAGGTTTTAGATTCAAATTTTATATTGCCATTGTAAGGAAGATACTAGAGGCATAATTTAGTCTTGAAGTGAGAGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00118	295765	298667	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0031072 heat shock protein binding

GO:0051082 unfolded protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.388
SRR1783600	control	3.369
SRR1783602	moderate drought stress	2.570
SRR1811619	moderate drought stress	2.567

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.379
DRR006520	Root Summer glycyrrhizin high producing strain	4.332
DRR006521	Root Winter glycyrrhizin high producing strain	1.974
DRR006522	Root Winter glycyrrhizin high producing strain	2.017
DRR006523	Root Summer glycyrrhizin low producing strain	2.418
DRR006524	Root Summer glycyrrhizin low producing strain	2.518
DRR006525	Leaf Summer glycyrrhizin high producing strain	83.955
DRR006526	Leaf Summer glycyrrhizin high producing strain	84.280

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.733
SRR2868004	Drought Stress (root)	6.504
SRR2967015	Control (root)	4.720

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	74.401
SRR9715740	Leaf	85.583
SRR9715741	Leaf	46.403
SRR9715739	Root	2.606
SRR9715742	Root	2.128
SRR9715743	Root	2.757

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.382
SRR8749028	MeJA induced 9h	2.694
SRR8749029	MeJA induced 9h	2.525
SRR8749030	Uninduced	1.134
SRR8749031	Uninduced	0.226
SRR8749032	Uninduced	0.287

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.357
SRR8400027	Control - Root	11.190