Gene detail information of Glyur000118s00009673.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75710.1 | 3.00E-118 | C2H2-like zinc finger protein |
| NR | XP_004499248.1 | 0 | PREDICTED: uncharacterized protein LOC101513058 [Cicer arietinum] |
| trEMBL | tr|G7I760|G7I760_MEDTR | 0 | C2H2-like zinc finger protein {ECO:0000313|EMBL:AES59723.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00118 | 265742 | 271297 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 48.300 |
| SRR1783600 | control | 47.698 |
| SRR1783602 | moderate drought stress | 26.013 |
| SRR1811619 | moderate drought stress | 25.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.054 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.749 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.886 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.601 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.184 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.915 |
| SRR2868004 | Drought Stress (root) | 13.433 |
| SRR2967015 | Control (root) | 12.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.368 |
| SRR9715740 | Leaf | 7.400 |
| SRR9715741 | Leaf | 3.510 |
| SRR9715739 | Root | 15.834 |
| SRR9715742 | Root | 20.216 |
| SRR9715743 | Root | 18.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.562 |
| SRR8749028 | MeJA induced 9h | 0.840 |
| SRR8749029 | MeJA induced 9h | 2.243 |
| SRR8749030 | Uninduced | 0.985 |
| SRR8749031 | Uninduced | 0.297 |
| SRR8749032 | Uninduced | 3.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.645 |
| SRR8400027 | Control - Root | 21.173 |