Gene detail information of Glyur000118s00009667 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75750.1 | 2.00E-20 | GAST1 protein homolog 1 |
| NR | XP_006599930.1 | 1.66E-40 | PREDICTED: gibberellin-regulated protein 1-like [Glycine max] |
| Swissprot | tr|P46689|GASA1_ARATH | 1.00E-25 | Gibberellin-regulated protein 1 (Precursor) |
| trEMBL | tr|K7MGL2|K7MGL2_SOYBN | 4.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G21230.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00118 | 232555 | 234455 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000118s00009667.1 | PF02704.9 | GASA | 47 | 106 | 1.70E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.954 |
| SRR1783600 | control | 1.010 |
| SRR1783602 | moderate drought stress | 0.554 |
| SRR1811619 | moderate drought stress | 0.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.903 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.649 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.615 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.630 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 73.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 74.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.526 |
| SRR2868004 | Drought Stress (root) | 0.877 |
| SRR2967015 | Control (root) | 0.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.873 |
| SRR9715740 | Leaf | 22.162 |
| SRR9715741 | Leaf | 1.858 |
| SRR9715739 | Root | 0.324 |
| SRR9715742 | Root | 0.357 |
| SRR9715743 | Root | 0.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.145 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.591 |
| SRR8400027 | Control - Root | 0.829 |