Gene detail information of Glyur000118s00009660 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30755.1 | 6.00E-105 | Protein of unknown function (DUF668) |
| NR | XP_003589496.1 | 0 | hypothetical protein MTR_1g025340 [Medicago truncatula] |
| trEMBL | tr|G7I7P5|G7I7P5_MEDTR | 0 | DUF668 family protein {ECO:0000313|EMBL:AES59747.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00118 | 193057 | 199086 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000118s00009660.1 | PF05003.7 | DUF668 | 235 | 319 | 2.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.850 |
| SRR1783600 | control | 0.870 |
| SRR1783602 | moderate drought stress | 1.858 |
| SRR1811619 | moderate drought stress | 1.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.056 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.056 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.055 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.041 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.510 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.664 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.996 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.611 |
| SRR2868004 | Drought Stress (root) | 24.648 |
| SRR2967015 | Control (root) | 17.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.898 |
| SRR9715740 | Leaf | 5.129 |
| SRR9715741 | Leaf | 34.357 |
| SRR9715739 | Root | 0.786 |
| SRR9715742 | Root | 0.838 |
| SRR9715743 | Root | 0.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.586 |
| SRR8749028 | MeJA induced 9h | 44.515 |
| SRR8749029 | MeJA induced 9h | 67.202 |
| SRR8749030 | Uninduced | 126.445 |
| SRR8749031 | Uninduced | 179.567 |
| SRR8749032 | Uninduced | 125.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.898 |
| SRR8400027 | Control - Root | 5.134 |