Gene detail information of Glyur000118s00009657 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20030.2 | 7.00E-109 | Pathogenesis-related thaumatin superfamily protein |
| NR | XP_004499280.1 | 0 | PREDICTED: thaumatin-like protein 1-like [Cicer arietinum] |
| Swissprot | tr|P83332|TLP1_PRUPE | 5.00E-91 | Thaumatin-like protein 1 (Precursor) |
| trEMBL | tr|K7M8K8|K7M8K8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G40351.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00118 | 183748 | 187576 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000118s00009657.1 | PF00314.12 | Thaumatin | 33 | 249 | 6.10E-91 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.161 |
| SRR1783600 | control | 12.789 |
| SRR1783602 | moderate drought stress | 10.284 |
| SRR1811619 | moderate drought stress | 10.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.895 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.153 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.060 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.060 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.430 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.938 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.993 |
| SRR2868004 | Drought Stress (root) | 51.053 |
| SRR2967015 | Control (root) | 53.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.137 |
| SRR9715740 | Leaf | 3.985 |
| SRR9715741 | Leaf | 32.792 |
| SRR9715739 | Root | 13.330 |
| SRR9715742 | Root | 24.279 |
| SRR9715743 | Root | 22.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.182 |
| SRR8749028 | MeJA induced 9h | 22.081 |
| SRR8749029 | MeJA induced 9h | 16.477 |
| SRR8749030 | Uninduced | 36.704 |
| SRR8749031 | Uninduced | 99.397 |
| SRR8749032 | Uninduced | 81.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.332 |
| SRR8400027 | Control - Root | 47.337 |