Gene detail information of Glyur000118s00009651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24200.1 | 4.00E-08 | Transcription elongation factor (TFIIS) family protein |
| NR | XP_006601358.1 | 2.19E-76 | PREDICTED: dentin sialophosphoprotein-like [Glycine max] |
| trEMBL | tr|I1MY40|I1MY40_SOYBN | 8.00E-77 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G37840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00118 | 122915 | 124223 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.629 |
| SRR1783600 | control | 2.555 |
| SRR1783602 | moderate drought stress | 3.843 |
| SRR1811619 | moderate drought stress | 4.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.017 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.456 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.305 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.768 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.572 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.032 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.589 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.200 |
| SRR2868004 | Drought Stress (root) | 0.420 |
| SRR2967015 | Control (root) | 0.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.537 |
| SRR9715740 | Leaf | 0.551 |
| SRR9715741 | Leaf | 0.263 |
| SRR9715739 | Root | 0.263 |
| SRR9715742 | Root | 0.519 |
| SRR9715743 | Root | 0.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.834 |
| SRR8749028 | MeJA induced 9h | 5.600 |
| SRR8749029 | MeJA induced 9h | 3.474 |
| SRR8749030 | Uninduced | 8.090 |
| SRR8749031 | Uninduced | 11.118 |
| SRR8749032 | Uninduced | 12.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.988 |
| SRR8400027 | Control - Root | 1.289 |