Gene detail

Gene detail information of Glyur000117s00007681

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G11060.1	1.00E-110	WAPL (Wings apart-like protein regulation of heterochromatin) protein
NR	XP_004505031.1	0	PREDICTED: uncharacterized protein LOC101498764 [Cicer arietinum]
trEMBL	tr\|A0A072UNY9\|A0A072UNY9_MEDTR	0	WAPL (Wings apart-like protein regulation of heterochromatin) protein, putative {ECO:0000313\|EMBL:KEH31101.1}

Sequence

Transcript Sequence

>Glyur000117s00007681.1
CAAAATAGCACTGAATTTGATAATAAAAAAAAAATTCAAATTGACGCAAAAACCTCAATTGAAATCCTCCACCTTCTTCGCGTTCTTCCTTCAGCTCAGCAAGCTGAATTTGAATTCCACTCTCTTCGATTTTTCCGTTTCATCCGAATTCTGACTCTCTTCTCCCCAAAAAGCCCTTGCCTTGTCCAAAAAAAAAATGCCCGATCCTTATCCCTCGACATAGCCGCCACGCCACGCCACGCCACGCCACCAACCACCACAAACCACCGATCTCCGATCTCCGGATCCGAAAGATGATCGTTCGCACCTACGGTCGCCGCAAAGGAGCGATTTCGGGGACGTGCTCGGGCTCCTCCTCCCTAAACGACGACGTATCAGAGCCCTACGCGAGGGACTCCNTCTCCCAAGAACCCGACCCTCTCTACGGCGGCTTCGCATTCTCGTCCCAAGAATCCTCCTCTCACTGGTCCCTCTTCGATTCCGACCCCAATTCCATCGACGATTTGTGCGCCGGCGCCGGTCGCCGGGAGCCCAAGCGGCCGAGGGGCGTCGCCGAGAGGAACGGGCTCTCAATTCCGGCGACGTCGACGCTTATGGAGGCGCAGGAGTTCGGGGAGATGATGGAGCATGTGGATGAGGTCAATTTCGCCCTCGATGGACTCCGCAAGGGTCACCCTGTTCGGATCAGAAGGGCCAGCTTGGTCTCCCTNTTGTCCATTTGTGCCACCACACAGCAGCGAAGGCTTCTGCGCACTCAAGGGATGGCAAAGACAATAATTGATGCTATTTTGGGACTCGGTCTGGATGATTCTCCCAGCAATCTTGCAGCTGCAACCCTTTTCTACATTTTGACCAGTGATGGTCAAGATGATCATCTCCTTGAATCACCTGGTTGTGTTCAATTTCTAATCAAGTTGTTGAGACCAATTGTTTCCACAGCTATTGAAGACAAAGCTCCAAAATTTGGCTCTAAACTACTATCATTGCGTCAGAATGATGGCATGCNAAAAAATACAATGAGAAGATTGGACTCCAGCTCTGTTGCAGTTTTTTCTAAAGTTCAAGAAATACTAGTAAATTGCAAAGAACTAAAAACAACCTGTCAGAATGGCAGTGGGGTTGAGAGGCCAGAGTTATGCCCAAAATGGTTAGCATTGCTGACTATGGAGAAGGCTTGTTTATCTGCTATTTCGCTTGATGAAACCTCTGGTGCCGTACGGAAGGCTGGTGGAAATTTTAAGGAAAAACTAAGGGAGCATGGAGGACTTGATGCAGTCTTTGAAGTCACCATGAATTGTCATTCAGATTTGGAGAATTTGATAGGGGATAGTTNTCTATCTACCAAAGATTTGAAAAATGACAAACGTCTGAAGAGCCTAACCTTGCTTCTCAAATGCCTGAAGATAATGGAAAATGCTACTTTCCTAAGCAAAGACAATCAGACTCATTTGCTTGGAATGAAAGGAAACTTGAGTCCTCAGGCAACCCCATTTTCTTTTACGGAGCTGATTATAATCATCATAAAGATGCTCTCAGAGAATGAGACTTTATCCATTAGTTCCAGTAGAAATTACTATGGCGTGGGGAGAGCCTCTTCTATTAAGAGTTCCAATTTTTCTTATAACAACCGACTGTTGAAACATACTCAGCTGGAAAGATCGCCATCCGTTTCTGAAACTCCCAGCACATCAACTACTGATACTTCTTCACTAAAGATGAGGATCAGTTCATCCACGTCTGGGTCTTGCAGTGGTTTATCAAAGACTTCATACTGTAAAACATCCATGACCCAAAGTAGTTCCAGGAAGAATGTGCATTTTACNGAAGGTACCCCACTTGTAATCTTGGATGATAGCCAAGATCCCTATGCATTTGATGCCATGACCCAAAGTAGTTCCAGGAAGAATGTGCATTTTACGAAAGGTACCCCACTTGTAATCTTGGATGATAGCCAAGAAGATCCCTATGCATTTGATGAGGATGACATTGCACCCTCTAAGTGGGACCTACTATCAGGGAAACAAAAAATATCTCATTCTAAAAAACATACGGTAGCAAACAGAGAATTTGAAAATGGATGTCAATCTCAAACCAATATGAGCCAGCAAGAATCAAGTGATGGGGACATCAATTGTTCCAGTTCTGATGTCAGTGATGAAGAAGGTTCCAACCTTCTAACTGATTGCCTTCTTACTGCCATTAAGGTGCTGATGAATTTGACTAATGACAACCCTGTTGGCTGTCAGCAAATTGCTGCCTATGGAGGACTGGAGACTATGTCTATGTTAATTGCTGGTCATTTCCCTTCTTTCAGCTCATCATTATCCTTCACTCAGATAAAGGAAAGTTCTCCAAGAACTGAAAAAGACCATCTATGTGATAGGCATCTTACTGATCATGAGTTAGATTTTCTTGTTGCTATTCTGGGCCTGCTTGTAAACCTGGTNGAGAAGGATGGTCGTAACAGATCACGGCTTGCAGCAGCCAGTGTTCTGCTACCTTCTTCAGAATGCTTGAACCAGGAGGTTCGGCGGGATGGNGAAAGTGAGGGAGCTGGGGAAGATAAACATTTCCAACTGAATGACGAGGCAGCTTTTATACAAGGTGAAAAAGAAGCTGAGAAAATGATTGTGGAGGCTTATTCTGCATTACTTCTAGCATTTCTTTCCACTGAAAGCAAGAGCATCCGTGCAGCAATTGCTGACAATCTTCCGGATCACAACTTAGCTAGTCTTGTACCTGTGTTGGACAGATTTGTGGAATTTCATCTGTCTTTGAACATGATTTCACCAGAGACTCATAAAGCTGTTAGCGAAGTCATTGAATCATGTAGAATTCGATGAAAGTTCAAATGGGAAAACTCTGTACAGCCACAGCATANATTAGGGTTTGTTGTTACACGGGAGAAAATGGAATTGCTGCAGCTCGCTAGCTTCATTAGAATCTGACCAACTTTTATACCCTGTTCGCAGTGCTTATACTCTTTATTTTTATATCACCATACTGGTGATACGGAGATGCTTGTATACAAAAAATCAATAGTGGGATGCGTTCCTAGCATAGTCTGTGTGTAATCAATAGTGGTGATTTTTTCAATATTTTTGTTTATTCATTCATTTTCTTGTATCGGAAGCTTGTATATTTTGTTTCAAGTTCTCACGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00117	318063	332378	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005488 binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000117s00007681.1	PF07814.8	WAPL	97	424	2.10E-81

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.171
SRR1783600	control	16.720
SRR1783602	moderate drought stress	15.009
SRR1811619	moderate drought stress	15.136

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	14.910
DRR006520	Root Summer glycyrrhizin high producing strain	14.865
DRR006521	Root Winter glycyrrhizin high producing strain	11.987
DRR006522	Root Winter glycyrrhizin high producing strain	12.020
DRR006523	Root Summer glycyrrhizin low producing strain	16.646
DRR006524	Root Summer glycyrrhizin low producing strain	16.534
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.749
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.884

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.395
SRR2868004	Drought Stress (root)	27.298
SRR2967015	Control (root)	27.241

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.897
SRR9715740	Leaf	20.723
SRR9715741	Leaf	21.759
SRR9715739	Root	5.196
SRR9715742	Root	19.691
SRR9715743	Root	15.825

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.760
SRR8749028	MeJA induced 9h	32.040
SRR8749029	MeJA induced 9h	30.720
SRR8749030	Uninduced	29.426
SRR8749031	Uninduced	65.873
SRR8749032	Uninduced	47.617

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.542
SRR8400027	Control - Root	22.679