Gene detail information of Glyur000117s00007662 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41690.1 | 5.00E-09 | heat shock transcription factor B3 |
| NR | XP_003516466.1 | 3.46E-81 | PREDICTED: heat stress transcription factor B-2a-like [Glycine max] |
| Swissprot | tr|O22230|HSFB3_ARATH | 1.00E-13 | Heat stress transcription factor B-3 |
| trEMBL | tr|I1J7X9|I1J7X9_SOYBN | 1.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G34490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00117 | 236821 | 238775 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.214 |
| SRR1783600 | control | 0.274 |
| SRR1783602 | moderate drought stress | 0.250 |
| SRR1811619 | moderate drought stress | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.322 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.381 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.458 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.573 |
| SRR2868004 | Drought Stress (root) | 10.317 |
| SRR2967015 | Control (root) | 6.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.513 |
| SRR9715740 | Leaf | 0.336 |
| SRR9715741 | Leaf | 0.200 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.059 |
| SRR9715743 | Root | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.280 |
| SRR8749028 | MeJA induced 9h | 0.101 |
| SRR8749029 | MeJA induced 9h | 0.200 |
| SRR8749030 | Uninduced | 29.383 |
| SRR8749031 | Uninduced | 67.885 |
| SRR8749032 | Uninduced | 46.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.759 |
| SRR8400027 | Control - Root | 3.418 |