Gene detail information of Glyur000117s00007643 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34700.1 | 6.00E-28 | Pollen Ole e 1 allergen and extensin family protein |
| NR | XP_004505067.1 | 5.95E-80 | PREDICTED: pistil-specific extensin-like protein-like [Cicer arietinum] |
| trEMBL | tr|I1M099|I1M099_SOYBN | 1.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G24720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00117 | 140999 | 143861 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000117s00007643.1 | PF01190.12 | Pollen_Ole_e_I | 166 | 243 | 2.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 614.463 |
| SRR1783600 | control | 654.066 |
| SRR1783602 | moderate drought stress | 126.175 |
| SRR1811619 | moderate drought stress | 126.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 266.903 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 267.181 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.696 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.833 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 85.382 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 89.040 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.476 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 107.241 |
| SRR2868004 | Drought Stress (root) | 47.584 |
| SRR2967015 | Control (root) | 72.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.932 |
| SRR9715740 | Leaf | 0.066 |
| SRR9715741 | Leaf | 1.322 |
| SRR9715739 | Root | 68.618 |
| SRR9715742 | Root | 57.730 |
| SRR9715743 | Root | 51.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.081 |
| SRR8749028 | MeJA induced 9h | 4.130 |
| SRR8749029 | MeJA induced 9h | 15.958 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.159 |
| SRR8749032 | Uninduced | 1.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 124.838 |
| SRR8400027 | Control - Root | 140.653 |