Gene detail information of Glyur000116s00009220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53800.2 | 3.00E-107 | |
| NR | XP_004494893.1 | 0 | PREDICTED: uncharacterized protein LOC101504898 [Cicer arietinum] |
| trEMBL | tr|I1JS71|I1JS71_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G42380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00116 | 110191 | 114166 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000116s00009220.1 | PF07460.6 | NUMOD3 | 113 | 140 | 0.0026 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.416 |
| SRR1783600 | control | 3.479 |
| SRR1783602 | moderate drought stress | 2.478 |
| SRR1811619 | moderate drought stress | 2.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.953 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.041 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.735 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.553 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.457 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.417 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.261 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.131 |
| SRR2868004 | Drought Stress (root) | 7.010 |
| SRR2967015 | Control (root) | 8.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.853 |
| SRR9715740 | Leaf | 57.811 |
| SRR9715741 | Leaf | 30.834 |
| SRR9715739 | Root | 0.448 |
| SRR9715742 | Root | 1.635 |
| SRR9715743 | Root | 1.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.364 |
| SRR8749028 | MeJA induced 9h | 11.324 |
| SRR8749029 | MeJA induced 9h | 7.513 |
| SRR8749030 | Uninduced | 5.133 |
| SRR8749031 | Uninduced | 3.059 |
| SRR8749032 | Uninduced | 3.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.475 |
| SRR8400027 | Control - Root | 4.958 |