Gene detail information of Glyur000116s00009212 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001183057.1 | 1.60E-15 | uncharacterized protein LOC100501400 [Zea mays] |
| trEMBL | tr|T1LCV8|T1LCV8_TRIUA | 5.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_02389-P1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00116 | 79585 | 82631 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.147 |
| SRR1783600 | control | 4.197 |
| SRR1783602 | moderate drought stress | 13.659 |
| SRR1811619 | moderate drought stress | 13.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.532 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.730 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.570 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.560 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.229 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.730 |
| SRR2868004 | Drought Stress (root) | 0.362 |
| SRR2967015 | Control (root) | 0.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.826 |
| SRR9715740 | Leaf | 4.653 |
| SRR9715741 | Leaf | 3.239 |
| SRR9715739 | Root | 2.302 |
| SRR9715742 | Root | 1.111 |
| SRR9715743 | Root | 2.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.026 |
| SRR8400027 | Control - Root | 2.790 |