Gene detail information of Glyur000116s00009211 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14280.1 | 3.00E-10 | |
| NR | NP_001237677.1 | 6.41E-66 | uncharacterized protein LOC100305853 [Glycine max] |
| trEMBL | tr|C6SWW2|C6SWW2_SOYBN | 2.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G45170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00116 | 74474 | 76773 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 69.761 |
| SRR1783600 | control | 68.529 |
| SRR1783602 | moderate drought stress | 102.685 |
| SRR1811619 | moderate drought stress | 101.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 63.052 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.877 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.301 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 47.509 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.927 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.652 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.249 |
| SRR2868004 | Drought Stress (root) | 111.176 |
| SRR2967015 | Control (root) | 84.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.818 |
| SRR9715740 | Leaf | 4.639 |
| SRR9715741 | Leaf | 5.225 |
| SRR9715739 | Root | 5.271 |
| SRR9715742 | Root | 15.484 |
| SRR9715743 | Root | 11.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.850 |
| SRR8749028 | MeJA induced 9h | 3.387 |
| SRR8749029 | MeJA induced 9h | 1.723 |
| SRR8749030 | Uninduced | 1.857 |
| SRR8749031 | Uninduced | 0.193 |
| SRR8749032 | Uninduced | 1.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 66.546 |
| SRR8400027 | Control - Root | 62.953 |