Gene detail information of Glyur000116s00009206 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14170.1 | 2.00E-119 | Plant protein of unknown function (DUF936) |
| NR | KHN16378.1 | 0 | hypothetical protein glysoja_033782 [Glycine soja] |
| trEMBL | tr|K7KH86|K7KH86_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G42470.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00116 | 46918 | 49766 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000116s00009206.1 | PF06075.7 | DUF936 | 4 | 532 | 3.40E-124 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.563 |
| SRR1783600 | control | 1.491 |
| SRR1783602 | moderate drought stress | 1.440 |
| SRR1811619 | moderate drought stress | 1.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.884 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.059 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.038 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.716 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.844 |
| SRR2868004 | Drought Stress (root) | 7.363 |
| SRR2967015 | Control (root) | 6.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.622 |
| SRR9715740 | Leaf | 3.400 |
| SRR9715741 | Leaf | 1.047 |
| SRR9715739 | Root | 0.173 |
| SRR9715742 | Root | 2.642 |
| SRR9715743 | Root | 2.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.097 |
| SRR8749028 | MeJA induced 9h | 0.165 |
| SRR8749029 | MeJA induced 9h | 0.268 |
| SRR8749030 | Uninduced | 0.021 |
| SRR8749031 | Uninduced | 0.346 |
| SRR8749032 | Uninduced | 0.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.778 |
| SRR8400027 | Control - Root | 12.209 |