Gene detail information of Glyur000115s00008280 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67550.1 | 2.00E-37 | |
| NR | KEH39494.1 | 0 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VBU4|A0A072VBU4_MEDTR | 0 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH39494.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 327684 | 331788 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.855 |
| SRR1783600 | control | 1.991 |
| SRR1783602 | moderate drought stress | 1.334 |
| SRR1811619 | moderate drought stress | 1.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.842 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.616 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.132 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.258 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.192 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.135 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.499 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.588 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.767 |
| SRR2868004 | Drought Stress (root) | 5.525 |
| SRR2967015 | Control (root) | 5.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.844 |
| SRR9715740 | Leaf | 3.229 |
| SRR9715741 | Leaf | 6.611 |
| SRR9715739 | Root | 0.333 |
| SRR9715742 | Root | 2.946 |
| SRR9715743 | Root | 1.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.560 |
| SRR8749028 | MeJA induced 9h | 45.166 |
| SRR8749029 | MeJA induced 9h | 35.365 |
| SRR8749030 | Uninduced | 99.258 |
| SRR8749031 | Uninduced | 33.673 |
| SRR8749032 | Uninduced | 19.302 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.817 |
| SRR8400027 | Control - Root | 1.433 |