Gene detail information of Glyur000115s00008278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003629291.1 | 2.00E-85 | Resistance protein [Medicago truncatula] |
| trEMBL | tr|G7LC17|G7LC17_MEDTR | 7.00E-86 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:AET03767.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 323349 | 326764 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.980 |
| SRR1783600 | control | 1.996 |
| SRR1783602 | moderate drought stress | 1.128 |
| SRR1811619 | moderate drought stress | 1.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.089 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.517 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.557 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.934 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.854 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.714 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.496 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.704 |
| SRR2868004 | Drought Stress (root) | 1.376 |
| SRR2967015 | Control (root) | 1.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.163 |
| SRR9715740 | Leaf | 0.299 |
| SRR9715741 | Leaf | 1.227 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.341 |
| SRR9715743 | Root | 0.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.227 |
| SRR8749028 | MeJA induced 9h | 0.255 |
| SRR8749029 | MeJA induced 9h | 0.347 |
| SRR8749030 | Uninduced | 0.236 |
| SRR8749031 | Uninduced | 0.245 |
| SRR8749032 | Uninduced | 0.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.389 |
| SRR8400027 | Control - Root | 0.508 |