Gene detail

Gene detail information of Glyur000115s00008276.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G43480.1	2.00E-129	Peroxidase superfamily protein
NR	KEH39498.1	0	peroxidase family protein [Medicago truncatula]
Swissprot	tr\|O22862\|PER26_ARATH	2.00E-161	Probable peroxidase 26 (Precursor)
trEMBL	tr\|A0A072VDI7\|A0A072VDI7_MEDTR	0	Peroxidase family protein {ECO:0000313\|EMBL:KEH39498.1}

Sequence

Transcript Sequence

>Glyur000115s00008276.1
ATGGGGAGAATTATGTGTGTGGCTTTNCCACTAATAGCTTTTGCAGTGTTGAGTTTGTGTCATGGGGTGGCAGATGCAGCACCAGCAGCAACTCCACGGCCAAAATTGCAGTGGCATTACTATAAGGTCCACAATACATGCCACGACGCAGAGGAGTATGTCCGGCACCAAGTGAAGCTGCTTTGGGACCATGACAAACGCATCACAGCAAAGTTACTCCGCTTGGTTTACACAGACTGTTTTGTCACTGGCTGCGATGCATCAATACTGCTTGACGAAGGACCAAATCCAGAGAAAAAAGCACCACAAAACCGGGGGCTTGGAGGATTTGTANTAATTGACAAGATCAAAACTGTTCTGGAATCACGATGCCCTGGAATTGTCTCCTGTGCTGATATACTTCACCTCGCCACCAGGGATGCTGCAAAACTGGCAGGTGCACCAGGTTATCCAGTTTTCACTGGAAGAAAAGATGGCATGAAATCAGATGCTGCAACGGTAGACCTGCCATCACCATCCATCTCATGGCAGGAAGCTCTGGCATACTTCAATTCAAGGGGCTTGGGTGTACTAGATATGACAACACTCTTAGGAGCACACACAATGGGCCAAACNCATTGTAGCCACATTGTTGATCGGCTGTATAATTACAATGGTACTGGAAACCCAGACCCAAGCATGAATGCTACTTTTCTNGACACAATGAAAAAACTTTGTCCACCAAGAATAAAGAAGGGACAACATGACCCACTGGTATACCTAAACCCAGAATCTGGATCAAATTTCATCTTCAGAGAATCATACTACAAAAGGATCCTGCATCATGAAGCTGTCCTGGGAGTTGATCAACAATTACTAAATGGCAATGACACTAAAGAGATCACCGGGGAATTTGCTGCTGGATTTGAAGATTTTCGGAGATCTTTTGCTCGATCAATGTTCAACATGGGGAATATCAAAGTTTTAACAGGAAATCAAGGAGAGATACGCCNGAATTGTCGATACACAAATAAGGGCAAGCTAAATTAGTAGCAGGCAAAATTGAATGTTTAGTGTGGATTCAGATATGCCCAGTTTAAACAGAATTGTTTGTGTTCTGAAGNTAAAGAATAATGCAAGAATAAGGGTACCCTCTTTGTCCTTTTTAAGTTCCACCAATTCAAGAAGTCACTAAAAAAATTGCTGTAGTATGTATAAACCATTATATANCCTTTTCTTCTGTCAACTAAAATCCACAACAAAGATTAACTATACGTTTCCATATGCTACAACAATCCCCTTCCCAGTNTCCACCCTCTTTCTTCTTGTATGCTTGTGCTTTTTCCAAACTCCAAGTCCTAAGTAATAATAGATATTTGTATGATTTTCTCCAGAAATATGAGCTGAACAAAAAATTGAAAGAAAATTATCTGCATAACCTGAGCGAAGTTTCCAAGACTGCCAATTTGTCAAACCTGGGAGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00115	310841	313032	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000115s00008276.1	PF00141.18	peroxidase	54	300	8.10E-60

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.563
SRR1783600	control	3.299
SRR1783602	moderate drought stress	4.235
SRR1811619	moderate drought stress	4.431

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.218
DRR006520	Root Summer glycyrrhizin high producing strain	5.850
DRR006521	Root Winter glycyrrhizin high producing strain	9.557
DRR006522	Root Winter glycyrrhizin high producing strain	9.329
DRR006523	Root Summer glycyrrhizin low producing strain	9.786
DRR006524	Root Summer glycyrrhizin low producing strain	9.951
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.690
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.553

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	74.687
SRR2868004	Drought Stress (root)	31.903
SRR2967015	Control (root)	28.444

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.234
SRR9715740	Leaf	1.933
SRR9715741	Leaf	3.665
SRR9715739	Root	0.386
SRR9715742	Root	1.970
SRR9715743	Root	1.723

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.650
SRR8749028	MeJA induced 9h	15.688
SRR8749029	MeJA induced 9h	16.058
SRR8749030	Uninduced	12.504
SRR8749031	Uninduced	4.781
SRR8749032	Uninduced	9.397

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.393
SRR8400027	Control - Root	2.264