Gene detail information of Glyur000115s00008270 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28460.1 | 3.00E-07 | |
| NR | XP_006442843.1 | 7.93E-28 | hypothetical protein CICLE_v10023861mg [Citrus clementina] |
| trEMBL | tr|V4T723|V4T723_9ROSI | 3.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:ESR56083.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 278710 | 278958 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.973 |
| SRR1783600 | control | 2.686 |
| SRR1783602 | moderate drought stress | 6.821 |
| SRR1811619 | moderate drought stress | 6.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.407 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.581 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.005 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.444 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.646 |
| SRR2868004 | Drought Stress (root) | 51.913 |
| SRR2967015 | Control (root) | 30.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.750 |
| SRR9715740 | Leaf | 6.555 |
| SRR9715741 | Leaf | 6.291 |
| SRR9715739 | Root | 45.660 |
| SRR9715742 | Root | 12.763 |
| SRR9715743 | Root | 15.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.619 |
| SRR8749028 | MeJA induced 9h | 164.607 |
| SRR8749029 | MeJA induced 9h | 132.010 |
| SRR8749030 | Uninduced | 398.286 |
| SRR8749031 | Uninduced | 247.863 |
| SRR8749032 | Uninduced | 52.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 46.447 |
| SRR8400027 | Control - Root | 47.563 |