Gene detail information of Glyur000115s00008254 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72750.1 | 5.00E-51 | translocase inner membrane subunit 23-2 |
| NR | XP_003543579.1 | 1.37E-105 | PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2-like [Glycine max] |
| Swissprot | tr|Q38820|TI232_ARATH | 1.00E-78 | Mitochondrial import inner membrane translocase subunit TIM23-2 |
| trEMBL | tr|I1M595|I1M595_SOYBN | 5.00E-106 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G42300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 215985 | 216551 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000115s00008254.1 | PF02466.14 | Tim17 | 55 | 180 | 1.90E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.242 |
| SRR1783600 | control | 10.812 |
| SRR1783602 | moderate drought stress | 11.774 |
| SRR1811619 | moderate drought stress | 11.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.551 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.160 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.897 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.821 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.696 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.150 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.600 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.541 |
| SRR2868004 | Drought Stress (root) | 22.653 |
| SRR2967015 | Control (root) | 16.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 75.480 |
| SRR9715740 | Leaf | 46.751 |
| SRR9715741 | Leaf | 82.092 |
| SRR9715739 | Root | 82.854 |
| SRR9715742 | Root | 73.670 |
| SRR9715743 | Root | 66.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.432 |
| SRR8749028 | MeJA induced 9h | 8.199 |
| SRR8749029 | MeJA induced 9h | 11.420 |
| SRR8749030 | Uninduced | 6.484 |
| SRR8749031 | Uninduced | 0.873 |
| SRR8749032 | Uninduced | 9.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.050 |
| SRR8400027 | Control - Root | 26.470 |