Gene detail information of Glyur000115s00008247 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11970.1 | 6.00E-19 | Protein of unknown function (DUF3511) |
| NR | KHN32708.1 | 3.76E-63 | hypothetical protein glysoja_022390 [Glycine soja] |
| trEMBL | tr|T2DMY2|T2DMY2_PHAVU | 3.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:AGV54821.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 176636 | 176995 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000115s00008247.1 | PF12023.3 | DUF3511 | 71 | 117 | 8.10E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.281 |
| SRR1783600 | control | 33.361 |
| SRR1783602 | moderate drought stress | 26.360 |
| SRR1811619 | moderate drought stress | 26.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.853 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.013 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.148 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.448 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.727 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.718 |
| SRR2868004 | Drought Stress (root) | 18.481 |
| SRR2967015 | Control (root) | 18.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.345 |
| SRR9715740 | Leaf | 2.255 |
| SRR9715741 | Leaf | 4.487 |
| SRR9715739 | Root | 17.980 |
| SRR9715742 | Root | 16.668 |
| SRR9715743 | Root | 19.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.023 |
| SRR8749028 | MeJA induced 9h | 2.044 |
| SRR8749029 | MeJA induced 9h | 2.364 |
| SRR8749030 | Uninduced | 8.721 |
| SRR8749031 | Uninduced | 1.165 |
| SRR8749032 | Uninduced | 0.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.400 |
| SRR8400027 | Control - Root | 48.612 |