Gene detail information of Glyur000115s00008246.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72710.10casein kinase 1-like protein 2
NRXP_003597565.10Casein kinase I isoform delta-like protein [Medicago truncatula]
COGYP_632759.18.00E-19serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|G7IS36|G7IS36_MEDTR0Casein kinase I-like protein {ECO:0000313|EMBL:AES67816.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00115169051174685+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K02218CSNK1, CKIEC:2.7.11.1MAPK signaling pathway - yeastmap04011
Hippo signaling pathway - multiple speciesmap04392


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000115s00008246.1PF00069.20Pkinase92507.00E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.261
SRR1783600control46.249
SRR1783602moderate drought stress47.318
SRR1811619moderate drought stress47.069

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain58.226
DRR006520Root Summer glycyrrhizin high producing strain57.185
DRR006521Root Winter glycyrrhizin high producing strain77.640
DRR006522Root Winter glycyrrhizin high producing strain75.670
DRR006523Root Summer glycyrrhizin low producing strain48.803
DRR006524Root Summer glycyrrhizin low producing strain48.559
DRR006525Leaf Summer glycyrrhizin high producing strain38.499
DRR006526Leaf Summer glycyrrhizin high producing strain38.283

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)92.464
SRR2868004Drought Stress (root)112.497
SRR2967015Control (root)108.268

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf71.140
SRR9715740Leaf79.932
SRR9715741Leaf82.640
SRR9715739Root38.372
SRR9715742Root50.998
SRR9715743Root51.547

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.305
SRR8749028MeJA induced 9h76.951
SRR8749029MeJA induced 9h40.069
SRR8749030Uninduced75.271
SRR8749031Uninduced41.141
SRR8749032Uninduced52.718

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root91.597
SRR8400027Control - Root82.118

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved