Gene detail information of Glyur000115s00008242.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63870.2 | 4.00E-115 | serine/threonine phosphatase 7 |
| NR | XP_004486848.1 | 0 | PREDICTED: serine/threonine-protein phosphatase 7 inactive homolog isoform X1 [Cicer arietinum] |
| COG | YP_003901943.1 | 3.00E-22 | bis(5'-nucleosyl)-tetraphosphatase [Vulcanisaeta distributa DSM 14429] |
| Swissprot | tr|Q9FN02|PPP7_ARATH | 8.00E-137 | Serine/threonine-protein phosphatase 7 |
| trEMBL | tr|K7M3M0|K7M3M0_SOYBN | 0 | Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 132566 | 139112 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K04460 | PPP5C | EC:3.1.3.16 | MAPK signaling pathway | map04010 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000115s00008242.1 | PF00149.23 | Metallophos | 260 | 480 | 1.20E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.300 |
| SRR1783600 | control | 5.279 |
| SRR1783602 | moderate drought stress | 7.859 |
| SRR1811619 | moderate drought stress | 7.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.114 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.134 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.108 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.659 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.514 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.548 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.523 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.574 |
| SRR2868004 | Drought Stress (root) | 12.834 |
| SRR2967015 | Control (root) | 13.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.664 |
| SRR9715740 | Leaf | 6.486 |
| SRR9715741 | Leaf | 6.675 |
| SRR9715739 | Root | 2.624 |
| SRR9715742 | Root | 9.462 |
| SRR9715743 | Root | 8.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.791 |
| SRR8749028 | MeJA induced 9h | 6.382 |
| SRR8749029 | MeJA induced 9h | 4.059 |
| SRR8749030 | Uninduced | 2.972 |
| SRR8749031 | Uninduced | 1.588 |
| SRR8749032 | Uninduced | 1.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.640 |
| SRR8400027 | Control - Root | 13.676 |