Gene detail information of Glyur000115s00008232 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13780.1 | 8.00E-42 | SMAD/FHA domain-containing protein |
| NR | XP_003597581.1 | 7.63E-107 | hypothetical protein MTR_2g099820 [Medicago truncatula] |
| trEMBL | tr|G7IS52|G7IS52_MEDTR | 3.00E-107 | SMAD/FHA domain protein, putative {ECO:0000313|EMBL:AES67832.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00115 | 77111 | 79380 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.673 |
| SRR1783600 | control | 1.771 |
| SRR1783602 | moderate drought stress | 2.660 |
| SRR1811619 | moderate drought stress | 2.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.380 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.026 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.568 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.341 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.701 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.596 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.605 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.449 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.992 |
| SRR2868004 | Drought Stress (root) | 3.505 |
| SRR2967015 | Control (root) | 4.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.806 |
| SRR9715740 | Leaf | 1.994 |
| SRR9715741 | Leaf | 1.801 |
| SRR9715739 | Root | 0.625 |
| SRR9715742 | Root | 1.611 |
| SRR9715743 | Root | 0.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.725 |
| SRR8749028 | MeJA induced 9h | 13.598 |
| SRR8749029 | MeJA induced 9h | 17.462 |
| SRR8749030 | Uninduced | 7.098 |
| SRR8749031 | Uninduced | 10.225 |
| SRR8749032 | Uninduced | 7.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.563 |
| SRR8400027 | Control - Root | 5.055 |