Gene detail information of Glyur000115s00008231


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G17650.11.00E-136glyoxylate reductase 2
NRXP_003597590.10hypothetical protein MTR_2g099910 [Medicago truncatula]
COGYP_001341401.13.00E-1073-hydroxyisobutyrate dehydrogenase [Marinomonas sp. MWYL1]
Swissprottr|F4I907|GLYR2_ARATH3.00E-170Glyoxylate/succinic semialdehyde reductase 2, chloroplastic (Precursor)
trEMBLtr|G7IUG9|G7IUG9_MEDTR0Glyoxylate/succinic semialdehyde reductase {ECO:0000313|EMBL:AES67841.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold001157224975985-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K18121GLYREC:1.1.1.79 1.1.1.-Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630
Butanoate metabolismmap00650


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004616  phosphogluconate dehydrogenase (decarboxylating) activity

GO:0016491  oxidoreductase activity

GO:0051287  NAD binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000115s00008231.1PF03446.10NAD_binding_2612201.60E-39
Glyur000115s00008231.1PF14833.1NAD_binding_112233422.20E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.828
SRR1783600control9.897
SRR1783602moderate drought stress14.241
SRR1811619moderate drought stress14.112

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.348
DRR006520Root Summer glycyrrhizin high producing strain21.016
DRR006521Root Winter glycyrrhizin high producing strain8.134
DRR006522Root Winter glycyrrhizin high producing strain7.960
DRR006523Root Summer glycyrrhizin low producing strain19.924
DRR006524Root Summer glycyrrhizin low producing strain19.181
DRR006525Leaf Summer glycyrrhizin high producing strain56.941
DRR006526Leaf Summer glycyrrhizin high producing strain57.031

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)9.021
SRR2868004Drought Stress (root)7.921
SRR2967015Control (root)8.172

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf25.031
SRR9715740Leaf39.754
SRR9715741Leaf19.594
SRR9715739Root5.688
SRR9715742Root4.997
SRR9715743Root5.516

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.290
SRR8749028MeJA induced 9h10.965
SRR8749029MeJA induced 9h9.093
SRR8749030Uninduced13.545
SRR8749031Uninduced3.145
SRR8749032Uninduced7.174

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root16.399
SRR8400027Control - Root16.823

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved