Gene detail information of Glyur000114s00010500 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31810.1 | 0 | Formin Homology 14 |
| NR | KEH27673.1 | 0 | actin-binding FH2 (formin-like) protein [Medicago truncatula] |
| Swissprot | tr|Q9C6S1|FH14_ARATH | 0 | Formin-like protein 14 |
| trEMBL | tr|A0A072UEY2|A0A072UEY2_MEDTR | 0 | Formin-like protein {ECO:0000256|RuleBase:RU361260} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 287625 | 302484 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000114s00010500.1 | PF10409.4 | PTEN_C2 | 200 | 339 | 2.30E-28 |
| Glyur000114s00010500.1 | PF02181.18 | FH2 | 771 | 1132 | 5.60E-104 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.893 |
| SRR1783600 | control | 3.852 |
| SRR1783602 | moderate drought stress | 3.647 |
| SRR1811619 | moderate drought stress | 3.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.378 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.186 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.064 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.823 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.429 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.622 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.315 |
| SRR2868004 | Drought Stress (root) | 8.548 |
| SRR2967015 | Control (root) | 9.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.729 |
| SRR9715740 | Leaf | 3.854 |
| SRR9715741 | Leaf | 3.731 |
| SRR9715739 | Root | 1.372 |
| SRR9715742 | Root | 4.722 |
| SRR9715743 | Root | 3.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.406 |
| SRR8749028 | MeJA induced 9h | 8.595 |
| SRR8749029 | MeJA induced 9h | 3.994 |
| SRR8749030 | Uninduced | 2.290 |
| SRR8749031 | Uninduced | 1.988 |
| SRR8749032 | Uninduced | 1.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.122 |
| SRR8400027 | Control - Root | 9.453 |