Gene detail information of Glyur000114s00010495 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22370.1 | 2.00E-122 | alternative oxidase 1A |
| NR | KHN42869.1 | 1.66E-163 | Alternative oxidase 1, mitochondrial [Glycine soja] |
| COG | YP_002262194.1 | 8.00E-59 | hypothetical protein VSAL_I0677 [Aliivibrio salmonicida LFI1238] |
| Swissprot | tr|Q07185|AOX1_SOYBN | 3.00E-162 | Ubiquinol oxidase 1, mitochondrial (Precursor) |
| trEMBL | tr|I1JVV5|I1JVV5_SOYBN | 4.00E-166 | Ubiquinol oxidase {ECO:0000256|RuleBase:RU003779} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 262840 | 269291 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000114s00010495.1 | PF01786.12 | AOX | 122 | 313 | 1.10E-70 |
| Glyur000114s00010495.1 | PF03055.10 | RPE65 | 297 | 374 | 3.20E-17 |
| Glyur000114s00010495.1 | PF01786.12 | AOX | 378 | 528 | 6.50E-65 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.370 |
| SRR1783600 | control | 1.355 |
| SRR1783602 | moderate drought stress | 0.687 |
| SRR1811619 | moderate drought stress | 0.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.535 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.552 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.528 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.276 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.770 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.814 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.367 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.381 |
| SRR2868004 | Drought Stress (root) | 75.466 |
| SRR2967015 | Control (root) | 22.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.741 |
| SRR9715740 | Leaf | 10.691 |
| SRR9715741 | Leaf | 11.322 |
| SRR9715739 | Root | 0.998 |
| SRR9715742 | Root | 25.919 |
| SRR9715743 | Root | 21.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 145.297 |
| SRR8749028 | MeJA induced 9h | 378.556 |
| SRR8749029 | MeJA induced 9h | 458.436 |
| SRR8749030 | Uninduced | 228.868 |
| SRR8749031 | Uninduced | 257.926 |
| SRR8749032 | Uninduced | 426.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.833 |
| SRR8400027 | Control - Root | 16.007 |