Gene detail information of Glyur000114s00010474 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN41746.1 | 8.52E-40 | hypothetical protein glysoja_003486 [Glycine soja] |
| trEMBL | tr|K7K3Z4|K7K3Z4_SOYBN | 3.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G35381.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 142048 | 144751 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000114s00010474.1 | PF12907.2 | zf-met2 | 34 | 63 | 5.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 149.020 |
| SRR1783600 | control | 152.501 |
| SRR1783602 | moderate drought stress | 73.894 |
| SRR1811619 | moderate drought stress | 72.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 121.388 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 120.858 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 76.909 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 76.193 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 94.600 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 95.431 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.090 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 83.394 |
| SRR2868004 | Drought Stress (root) | 88.521 |
| SRR2967015 | Control (root) | 96.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.344 |
| SRR9715740 | Leaf | 54.909 |
| SRR9715741 | Leaf | 63.485 |
| SRR9715739 | Root | 47.308 |
| SRR9715742 | Root | 37.336 |
| SRR9715743 | Root | 38.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.892 |
| SRR8749028 | MeJA induced 9h | 22.706 |
| SRR8749029 | MeJA induced 9h | 30.579 |
| SRR8749030 | Uninduced | 21.772 |
| SRR8749031 | Uninduced | 15.352 |
| SRR8749032 | Uninduced | 21.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 131.055 |
| SRR8400027 | Control - Root | 139.737 |