Gene detail information of Glyur000114s00010469 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34660.1 | 3.00E-96 | SH3 domain-containing protein |
| NR | XP_006573487.1 | 0 | PREDICTED: uncharacterized protein LOC100816554 [Glycine max] |
| trEMBL | tr|I1J846|I1J846_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G35400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 105726 | 109970 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000114s00010469.1 | PF14604.1 | SH3_9 | 302 | 350 | 7.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.812 |
| SRR1783600 | control | 8.794 |
| SRR1783602 | moderate drought stress | 9.828 |
| SRR1811619 | moderate drought stress | 9.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.882 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.476 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.354 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.645 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 50.105 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.834 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.892 |
| SRR2868004 | Drought Stress (root) | 14.864 |
| SRR2967015 | Control (root) | 16.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.574 |
| SRR9715740 | Leaf | 14.077 |
| SRR9715741 | Leaf | 16.107 |
| SRR9715739 | Root | 9.331 |
| SRR9715742 | Root | 25.490 |
| SRR9715743 | Root | 21.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.871 |
| SRR8749028 | MeJA induced 9h | 58.841 |
| SRR8749029 | MeJA induced 9h | 82.386 |
| SRR8749030 | Uninduced | 131.711 |
| SRR8749031 | Uninduced | 37.928 |
| SRR8749032 | Uninduced | 36.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.160 |
| SRR8400027 | Control - Root | 20.742 |