Gene detail information of Glyur000114s00010468 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G31460.1 | 1.00E-13 | |
| NR | AFK38024.1 | 1.36E-87 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SCN2|I3SCN2_LOTJA | 5.00E-88 | Uncharacterized protein {ECO:0000313|EMBL:AFK38024.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00114 | 102002 | 102847 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.931 |
| SRR1783600 | control | 13.559 |
| SRR1783602 | moderate drought stress | 15.315 |
| SRR1811619 | moderate drought stress | 16.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.860 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.724 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.751 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.799 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.543 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.574 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.883 |
| SRR2868004 | Drought Stress (root) | 5.047 |
| SRR2967015 | Control (root) | 7.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.730 |
| SRR9715740 | Leaf | 17.733 |
| SRR9715741 | Leaf | 12.518 |
| SRR9715739 | Root | 14.211 |
| SRR9715742 | Root | 10.480 |
| SRR9715743 | Root | 12.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.427 |
| SRR8749028 | MeJA induced 9h | 2.746 |
| SRR8749029 | MeJA induced 9h | 1.329 |
| SRR8749030 | Uninduced | 0.499 |
| SRR8749031 | Uninduced | 0.179 |
| SRR8749032 | Uninduced | 0.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.598 |
| SRR8400027 | Control - Root | 13.996 |