Gene detail information of Glyur000113s00009458 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21740.1 | 7.00E-53 | Protein of unknown function (DUF630 and DUF632) |
| NR | KEH44380.1 | 0 | DUF630 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072W2C8|A0A072W2C8_MEDTR | 0 | DUF630 family protein {ECO:0000313|EMBL:KEH44380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00113 | 264111 | 267811 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000113s00009458.1 | PF04783.7 | DUF630 | 1 | 60 | 3.40E-21 |
| Glyur000113s00009458.1 | PF04782.7 | DUF632 | 285 | 608 | 9.80E-100 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.634 |
| SRR1783600 | control | 1.621 |
| SRR1783602 | moderate drought stress | 4.095 |
| SRR1811619 | moderate drought stress | 3.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.305 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.291 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.877 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.151 |
| SRR2868004 | Drought Stress (root) | 1.928 |
| SRR2967015 | Control (root) | 1.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.063 |
| SRR9715740 | Leaf | 0.298 |
| SRR9715741 | Leaf | 0.561 |
| SRR9715739 | Root | 0.054 |
| SRR9715742 | Root | 0.563 |
| SRR9715743 | Root | 0.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.234 |
| SRR8749028 | MeJA induced 9h | 0.094 |
| SRR8749029 | MeJA induced 9h | 0.426 |
| SRR8749030 | Uninduced | 0.314 |
| SRR8749031 | Uninduced | 0.455 |
| SRR8749032 | Uninduced | 0.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.801 |
| SRR8400027 | Control - Root | 3.396 |