Gene detail information of Glyur000113s00009448 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16990.2 | 2.00E-22 | Major facilitator superfamily protein |
| NR | XP_004497200.1 | 8.58E-88 | PREDICTED: hippocampus abundant transcript 1 protein-like [Cicer arietinum] |
| trEMBL | tr|A0A072VRW4|A0A072VRW4_MEDTR | 2.00E-87 | MFS transporter {ECO:0000313|EMBL:KEH44396.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00113 | 212854 | 215453 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.438 |
| SRR1783600 | control | 3.643 |
| SRR1783602 | moderate drought stress | 4.768 |
| SRR1811619 | moderate drought stress | 3.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.729 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.342 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.262 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.135 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.383 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.316 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.900 |
| SRR2868004 | Drought Stress (root) | 1.798 |
| SRR2967015 | Control (root) | 1.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.434 |
| SRR9715740 | Leaf | 3.532 |
| SRR9715741 | Leaf | 3.704 |
| SRR9715739 | Root | 1.172 |
| SRR9715742 | Root | 3.633 |
| SRR9715743 | Root | 3.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.912 |
| SRR8749028 | MeJA induced 9h | 0.288 |
| SRR8749029 | MeJA induced 9h | 0.242 |
| SRR8749030 | Uninduced | 0.214 |
| SRR8749031 | Uninduced | 0.132 |
| SRR8749032 | Uninduced | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.719 |
| SRR8400027 | Control - Root | 3.257 |