Gene detail information of Glyur000113s00009444 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G16990.2 | 5.00E-13 | Major facilitator superfamily protein |
| NR | XP_004497200.1 | 8.72E-26 | PREDICTED: hippocampus abundant transcript 1 protein-like [Cicer arietinum] |
| trEMBL | tr|A0A072VRW4|A0A072VRW4_MEDTR | 4.00E-24 | MFS transporter {ECO:0000313|EMBL:KEH44396.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00113 | 187349 | 189115 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.135 |
| SRR1783600 | control | 15.432 |
| SRR1783602 | moderate drought stress | 12.037 |
| SRR1811619 | moderate drought stress | 13.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.114 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.053 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.808 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.801 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.259 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.073 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.788 |
| SRR2868004 | Drought Stress (root) | 6.572 |
| SRR2967015 | Control (root) | 7.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.915 |
| SRR9715740 | Leaf | 3.292 |
| SRR9715741 | Leaf | 2.342 |
| SRR9715739 | Root | 7.672 |
| SRR9715742 | Root | 16.444 |
| SRR9715743 | Root | 15.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.660 |
| SRR8749028 | MeJA induced 9h | 0.815 |
| SRR8749029 | MeJA induced 9h | 0.631 |
| SRR8749030 | Uninduced | 0.191 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.441 |
| SRR8400027 | Control - Root | 9.285 |