Gene detail information of Glyur000113s00009432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62420.1 | 2.00E-25 | Protein of unknown function (DUF506) |
| NR | AES92702.2 | 3.10E-53 | DUF506 family protein [Medicago truncatula] |
| trEMBL | tr|G7JKH5|G7JKH5_MEDTR | 1.00E-53 | DUF506 family protein {ECO:0000313|EMBL:AES92702.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00113 | 84829 | 85803 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000113s00009432.1 | PF04720.7 | DUF506 | 67 | 253 | 1.70E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.585 |
| SRR1783600 | control | 4.625 |
| SRR1783602 | moderate drought stress | 5.972 |
| SRR1811619 | moderate drought stress | 6.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.213 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.080 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.036 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.024 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.269 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.490 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.732 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.207 |
| SRR2868004 | Drought Stress (root) | 3.869 |
| SRR2967015 | Control (root) | 5.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.490 |
| SRR9715740 | Leaf | 0.772 |
| SRR9715741 | Leaf | 1.352 |
| SRR9715739 | Root | 0.464 |
| SRR9715742 | Root | 4.876 |
| SRR9715743 | Root | 4.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.632 |
| SRR8749028 | MeJA induced 9h | 7.931 |
| SRR8749029 | MeJA induced 9h | 1.549 |
| SRR8749030 | Uninduced | 0.363 |
| SRR8749031 | Uninduced | 0.263 |
| SRR8749032 | Uninduced | 0.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.316 |
| SRR8400027 | Control - Root | 7.483 |