Gene detail information of Glyur000112s00012346 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G27970.2 | 3.00E-04 | ARM repeat superfamily protein |
| NR | XP_003591042.1 | 2.82E-06 | MON2-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072VNP6|A0A072VNP6_MEDTR | 1.00E-06 | Armadillo/beta-catenin-like repeat protein {ECO:0000313|EMBL:KEH43043.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00112 | 331229 | 336592 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.231 |
| SRR1783600 | control | 1.155 |
| SRR1783602 | moderate drought stress | 2.269 |
| SRR1811619 | moderate drought stress | 2.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.547 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.475 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.724 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.019 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.921 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.737 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.731 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.534 |
| SRR2868004 | Drought Stress (root) | 6.443 |
| SRR2967015 | Control (root) | 2.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.184 |
| SRR9715740 | Leaf | 1.576 |
| SRR9715741 | Leaf | 2.890 |
| SRR9715739 | Root | 0.185 |
| SRR9715742 | Root | 0.973 |
| SRR9715743 | Root | 1.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.827 |
| SRR8749028 | MeJA induced 9h | 1.786 |
| SRR8749029 | MeJA induced 9h | 0.627 |
| SRR8749030 | Uninduced | 1.040 |
| SRR8749031 | Uninduced | 1.540 |
| SRR8749032 | Uninduced | 1.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.641 |
| SRR8400027 | Control - Root | 3.125 |