Gene detail information of Glyur000112s00012345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G44780.2 | 2.00E-40 | |
| NR | XP_003601051.1 | 9.49E-109 | hypothetical protein MTR_3g072480 [Medicago truncatula] |
| trEMBL | tr|G7J309|G7J309_MEDTR | 4.00E-109 | Histone chaperone domain CHZ protein {ECO:0000313|EMBL:AES71302.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00112 | 313945 | 320961 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.427 |
| SRR1783600 | control | 21.085 |
| SRR1783602 | moderate drought stress | 27.244 |
| SRR1811619 | moderate drought stress | 26.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.878 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.355 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.638 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.083 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.506 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.320 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.985 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.771 |
| SRR2868004 | Drought Stress (root) | 20.226 |
| SRR2967015 | Control (root) | 18.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.187 |
| SRR9715740 | Leaf | 15.062 |
| SRR9715741 | Leaf | 11.365 |
| SRR9715739 | Root | 1.005 |
| SRR9715742 | Root | 7.300 |
| SRR9715743 | Root | 6.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.429 |
| SRR8749028 | MeJA induced 9h | 13.789 |
| SRR8749029 | MeJA induced 9h | 11.648 |
| SRR8749030 | Uninduced | 7.780 |
| SRR8749031 | Uninduced | 4.140 |
| SRR8749032 | Uninduced | 4.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.785 |
| SRR8400027 | Control - Root | 24.936 |