Gene detail information of Glyur000112s00012343 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G44800.1 | 4.00E-23 | nodulin MtN21 /EamA-like transporter family protein |
| NR | XP_006593592.1 | 3.64E-33 | PREDICTED: WAT1-related protein At1g44800-like [Glycine max] |
| Swissprot | tr|Q9LPF1|WTR8_ARATH | 5.00E-27 | WAT1-related protein At1g44800 |
| trEMBL | tr|C6TJW0|C6TJW0_SOYBN | 1.00E-33 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00112 | 300624 | 304475 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.572 |
| SRR1783600 | control | 12.662 |
| SRR1783602 | moderate drought stress | 11.062 |
| SRR1811619 | moderate drought stress | 10.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.354 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.110 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.077 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.653 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 83.879 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 83.455 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.846 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 174.649 |
| SRR2868004 | Drought Stress (root) | 214.983 |
| SRR2967015 | Control (root) | 314.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.704 |
| SRR9715740 | Leaf | 1.290 |
| SRR9715741 | Leaf | 1.029 |
| SRR9715739 | Root | 31.016 |
| SRR9715742 | Root | 109.938 |
| SRR9715743 | Root | 94.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.148 |
| SRR8749030 | Uninduced | 0.761 |
| SRR8749031 | Uninduced | 0.047 |
| SRR8749032 | Uninduced | 2.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.500 |
| SRR8400027 | Control - Root | 19.300 |