Gene detail

Gene detail information of Glyur000112s00012332.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G01350.1	2.00E-144	quinolinate phoshoribosyltransferase
NR	XP_004498323.1	0	PREDICTED: probable nicotinate-nucleotide pyrophosphorylase [carboxylating]-like isoform X2 [Cicer arietinum]
COG	YP_003289511.1	7.00E-92	nicotinate-nucleotide pyrophosphorylase [Rhodothermus marinus DSM 4252]
Swissprot	tr\|Q9ZU32\|NADC_ARATH	0	Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic (Precursor)
trEMBL	tr\|A0A072VQY4\|A0A072VQY4_MEDTR	0	Quinolinate phosphoribosyltransferase, putative {ECO:0000313\|EMBL:KEH40550.1}

Sequence

Transcript Sequence

>Glyur000112s00012332.1
GCTGAACCCGAGTGTTGTTTTCTGTGTTCCTTTTTGCTGTTGTTTTTCCTTCCTTTTTAGCTTTTCCTACCCAAAAAAAAAAAAACGAAGGGCTCGATGGGTCACACACACACACACACAAGTTAACGAACTTTTTGATTTCAGAATCAGAATCGAGTTCCCACTTCTAACTTGCTTACATTGCTTATCCTCCCGCCGATAGTTCCAAAGAAGAGAGCGAGCTTGATAACTGGTGGTCTTAGCTCTTCTTAGGACACAACTTTTGAAATTGTAACAAAAAAGCCTCAAAGTTGTCTCTGATTATGGCTATGAACTGCAGACAAGGCCTCTCGCTTAAACTCCAACGCCAGCCAAAACTCAGGAGGGTAGTTAAAATGTCTGCAACTGAACTCACAAACCCTAGGATCTCATATGAGTCCTTTGCAATAAAGCCTCCCGTGCACCCTACTTATGATTTGAAGGGCATTATCAAGTTAGCCCTTGCAGAAGATGCTGGGGATCGAGGTGATGTAACATGCATGGCCACCATTCCATCTGACATGGAAGTAGAAGCTTATTTCTTGGCAAAGGAGGATGGCATCGTTGCTGGAATTGCACTTGCAGAGATGATATTTCATGAGGTTGATCCTTCTTTAAAGGTGGAGTGGTCTAAAAATGATGGAGATTTTATCCATAAAGGACTACAGTTTGGAAAAGTTCATGGACGGGCACATAACATTGTTGTAGCTGAAAGGGTAGTGCTAAACTTTATGCAGAGGATGAGTGGCATTGCAACTTTAACTAAGGCAATGGCAAATGCAGCACACCCTGCATATATGTTGGAAACTAGAAAAACTGCTCCAGGTTTACGTTTATTGGATAAGTGGGCGGTATTAATTGGTGGAGGTCGAAATCATAGGATGGGCTTGTTTGATATGGTTTTGATAAAAGATAATCATATATCAACAGCTGGAGGTGTTACAAATGCCCTCAAAGCTGTCGATCTGTATCTAGAGCAAAATAACCTCCAAATGGAGGTTGAGGTTGAGACCAGGACTCTTGAAGAAGTGGAAGAAGTATTACATTATGCATCTGAAACAAAGACTTCTTTAACTCGAATAATGTTGGATAATATGGTCGTACCTTTACCAAATGGAGATGTGGACATATCTATGCTGAAAGAAGCTGTGCGGTTGGTCGATGGGAGATTTGAAACTGAGGCATCCGGCAATGTTACTATGGATACGGTACATAAAATCGGGCAAAGTGGAGTAACCTACATTTCTAGTGGTTCCTTGACTCATTCAGTGAAAGCACTTGACATCTCCCTCAAAATTGATACCGAATTGGCGCTTAAAGTTGGAAGGCGCACCGGACGAGCTTGATCATGATATTTGCTTATATTATTTCTTGCTGCACTGATCCTCACTATGCTGCATGCATATCTTAAATCGGCTTATGGTTACAGTCTGGTGTGACTTTCATAAAGTAACAAAATACAACTCAAATNAAAGATGTAGAGAAGTACTGAACATTTTTCTTTGTTAATAAGGAATCTTGTAAATTGGAGATGAATTACTCTTTACCATCATTTGACTAGATGGTGGGTAGAAAGACTAAGCGCTGTTCCACCAGTTAGCAATACTTTTGAAATTGGAACAATTCAATGTAAAACAAGATTTTTAGCTCGTTTGAAATTGGTAAATACACCCCATAGTTTTTGACATACACCCNATATTAATGTAAAAATTTCAAAAATATCCTCCAATTTCGCATGGAGTTTCCGGAATGTAAATTTGTATTNCGGAAACTGAAGTTTTCGGAATACAAATCCANAATACAAATTTGTATTCCGGAAGTTTTCGNAATGCAAATTTGTATTCTGAAAATTNCANTCAAATTTGTATTNCAAAAATTTCAGTTTTCAGAATACAAAATTGTATTCCGGAAACTCTAATCTCCGTGCAATTTGTATTCTAGAAACTCAAGTTTTCATAAATGATGCAAAATTGGAGGGTATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00112	213079	219688	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00767	nadC, QPRT	EC:2.4.2.19	Nicotinate and nicotinamide metabolism	map00760

Gene Ontology

biological_process

GO:0009435 NAD biosynthetic process

GO:0019363 pyridine nucleotide biosynthetic process

molecular_function

GO:0003824 catalytic activity

GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity

GO:0016763 transferase activity, transferring pentosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000112s00012332.1	PF02749.11	QRPTase_N	66	154	7.70E-25
Glyur000112s00012332.1	PF01729.14	QRPTase_C	156	337	4.30E-57

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.211
SRR1783600	control	14.118
SRR1783602	moderate drought stress	12.118
SRR1811619	moderate drought stress	12.024

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	21.291
DRR006520	Root Summer glycyrrhizin high producing strain	21.405
DRR006521	Root Winter glycyrrhizin high producing strain	21.057
DRR006522	Root Winter glycyrrhizin high producing strain	20.185
DRR006523	Root Summer glycyrrhizin low producing strain	18.992
DRR006524	Root Summer glycyrrhizin low producing strain	19.303
DRR006525	Leaf Summer glycyrrhizin high producing strain	39.042
DRR006526	Leaf Summer glycyrrhizin high producing strain	38.977

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	27.715
SRR2868004	Drought Stress (root)	28.029
SRR2967015	Control (root)	25.284

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	28.097
SRR9715740	Leaf	32.888
SRR9715741	Leaf	31.978
SRR9715739	Root	5.178
SRR9715742	Root	8.744
SRR9715743	Root	8.443

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.610
SRR8749028	MeJA induced 9h	27.545
SRR8749029	MeJA induced 9h	23.343
SRR8749030	Uninduced	16.544
SRR8749031	Uninduced	12.981
SRR8749032	Uninduced	11.572

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.493
SRR8400027	Control - Root	19.775