Gene detail information of Glyur000112s00012330 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70890.1 | 4.00E-25 | MLP-like protein 43 |
| NR | NP_001236164.1 | 1.09E-75 | uncharacterized protein LOC100527699 [Glycine max] |
| Swissprot | tr|Q9SSK5|MLP43_ARATH | 2.00E-30 | MLP-like protein 43 |
| trEMBL | tr|C6T551|C6T551_SOYBN | 4.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G21010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00112 | 203359 | 209117 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000112s00012330.1 | PF00407.14 | Bet_v_1 | 36 | 173 | 2.90E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.392 |
| SRR1783600 | control | 15.769 |
| SRR1783602 | moderate drought stress | 17.010 |
| SRR1811619 | moderate drought stress | 17.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.043 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.209 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.361 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.515 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.617 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 253.140 |
| SRR2868004 | Drought Stress (root) | 169.620 |
| SRR2967015 | Control (root) | 181.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.873 |
| SRR9715740 | Leaf | 14.278 |
| SRR9715741 | Leaf | 13.952 |
| SRR9715739 | Root | 21.113 |
| SRR9715742 | Root | 24.623 |
| SRR9715743 | Root | 23.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.446 |
| SRR8749028 | MeJA induced 9h | 36.892 |
| SRR8749029 | MeJA induced 9h | 21.956 |
| SRR8749030 | Uninduced | 6.106 |
| SRR8749031 | Uninduced | 5.037 |
| SRR8749032 | Uninduced | 8.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 76.636 |
| SRR8400027 | Control - Root | 53.332 |