Gene detail information of Glyur000112s00012311 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004498527.1 | 4.58E-21 | PREDICTED: F-box/kelch-repeat protein At3g06240-like [Cicer arietinum] |
| trEMBL | tr|G8A0I2|G8A0I2_MEDTR | 3.00E-21 | F-box protein {ECO:0000313|EMBL:AES84970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00112 | 84325 | 85362 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000112s00012311.1 | PF07734.8 | FBA_1 | 70 | 115 | 0.00011 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.093 |
| SRR1783600 | control | 0.119 |
| SRR1783602 | moderate drought stress | 0.057 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.235 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.599 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.700 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.244 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.296 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.263 |
| SRR2868004 | Drought Stress (root) | 0.164 |
| SRR2967015 | Control (root) | 0.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.534 |
| SRR9715740 | Leaf | 0.717 |
| SRR9715741 | Leaf | 1.681 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.107 |
| SRR9715743 | Root | 0.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.026 |
| SRR8749028 | MeJA induced 9h | 4.354 |
| SRR8749029 | MeJA induced 9h | 4.873 |
| SRR8749030 | Uninduced | 2.683 |
| SRR8749031 | Uninduced | 3.627 |
| SRR8749032 | Uninduced | 7.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.064 |
| SRR8400027 | Control - Root | 0.108 |