Gene detail

Gene detail information of Glyur000111s00011082

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G48080.1	9.00E-131	alpha/beta-Hydrolases superfamily protein
NR	ACJ85703.1	0	unknown [Medicago truncatula]
Swissprot	tr\|Q9XF23\|EDS1L_ARATH	3.00E-155	Protein EDS1L {ECO:0000305}
trEMBL	tr\|B7FLS0\|B7FLS0_MEDTR	0	Uncharacterized protein {ECO:0000313\|EMBL:AFK39998.1}

Sequence

Transcript Sequence

>Glyur000111s00011082.1
CTTTTCCATCGGCTGGTTGCCATGTAAAGCAAAGCAAGTACAAGCTAGCTTCCGTGAAACTGCATAAGCCAATTCGTCAACTCATCAAATTCCAATTCATTTCCTTTCCCCTCCCTTTCTATTTATATAACAAGAAACCAATGAAGCAAACACAAATCAACAACCTTCTTCCGAAACAGGAGAAACATGGCTGGAGGGACACTTGGAGACAACATAGGACTGAGAGAAGAGGTTATCAATAAGGCATGTGCTTTGGCCTTCAAGGCTCACAACAAGTCACCGAAGGAGCACTATCTCTCCGAAAAGGTTCGCACTTCTTCTCCGGAAGCAGCTTCTTATCTCATCGTAAGCTTCCCTGGCTCATGGGTTGACACTGACTGGTTCGCTACCAAACCTTTCGGAGAGACTAAGGTAGATCTTGCCCTGTTCCCTTCCCTCACAAGTGTTGGTAACGATGAAGCTGCTCTAGTAAATGAAGCCTTTCTAAAAACATTCGATCGCGTGTTGAAGACTTCCTCAATTACATCCGAGGTGAATAGAGCTATGGCAGAAGGGAAGCAAATAGTGTTTACTGGGCACTCTTCTGGGGCTGCTGTGGCAATTTTTGCAACATTTTGGGCTTTGGAAGAGTTTCTTAACCCAACCAAGTTCAAAAAGCAGCACAAGCCTCCCCTTTGTGTCACTTTTGGTTCTCCCTTGGTTGGTAATCACATACTCTCTCATGCTTCAAGGCGAGAGATTTGGTCTCATCACTTCATACACTTTGTCATGAGATATGACATAGTGCCACGGGTTTTGCTTGCTCCTTTCTCTTCTATTGAGAACACATTTAGCACTGTTCTCCAGTTTTTGACCCCGAAGTCCAAGCCTTCTTCCACAACTCGAGATTCGGTAAGGGATCAGTTTTTCTCCTCTGTGATGAGGAATGCAACAACTGTTACAAGCCATGCTGCCTCTAACCTCATGGGCAGCACAAATTTGTTGCTGGAAACAGTGACAAGTTTTGTTGAGTTAAGCCCTTATAGGCCCTTTGGAACCTACATCTTCTGCAATGGTAATGGGCAGCTGGTTGTGGTGAAAAACTCGGACGCGGTCTTGCAACTCTTGCTCCACACGGCTCAGCTAAGCGATTTGGATAAACTTTCTGAGGTTGCCTACATAAGCATACTGCAACACCAGGCCTATGAAGATGAATTGGAGGATAGCTTGGGAATGCAGAATGTGGTGTACTTAAACAAACTTGATGACCTTCCCTTGTCTACTGATGGTTCTGATACTGATATCGCAGCAGCCTTGGATGGCCTTGGACTGAGCACAAGAGCAAGGCTGTGCATTCGAGCAGCTGGTGAGTTGGAAACCCAAAAGGGCAAAAATGAGGAGAAAGTCAGAAAGGAGATTGAGGAGAAAGCTGTGGCAAGCATGAGGGATTTGGAGGAGTACAAGGCAACATGTGAGTTACACAAGGGGAAGGGTTACTATGATGCCTTCAAGGTGCAAAAGGAGAATAAGGATTTCCAAGCAAATGTGAAGAGGCTGGTGCTGGCAGGAGTATGGGATGAGATCATTGAAATGCTGAAGAGGTATGAGCTCCCAGATGAGTTTGAAGGCAAGCAAGAATGGGTTAACCTTGGAACCAGCTACCGTCGCCTTGTGGAGCCTCTAGATATCGCCAACTATTACCGCCATTTGAAGAATGAAGACACGGGACCTTACATGATCAAGGCTAGGCCAAAAAGATATAGGTTCACTCAAAGATGGTTGGAGCATGCCAATAGGTTACCAAAGGGAGCTATCTCAGAATCCACCTTCTGGGCTGAGGTGGAGGAGCTTTGCAGCTGGATCAGTAGCAAGAAGCCTTACGAAGATGTCAAGGAAAGGGTTCTCCAACTTGAACAAGACATTAAAAAGTGGACTGACAAAGGGGAACTAACCAAGGATGTGTTCTTAAGGGATCCTACCTTTACGAAGTTGTGGGAAACTCTACCCGAGGAACACAAATCCATATCCTGCATCGCCGGTCTTGTTACCGTGACAGGATAGTCATCTACCCTAATTTCCACTCAACATGAAGCTATAGATTTTGGATGCAGTTGTTATGTATTGTATTGTATTGTATTGTATTGTATTGTCTTGCAGGTGTATTAGTTTGCTACTTTCTGTTGTACTGCTAATATTTATTCCCAAGTTTAGTGTGATGTAACTTGTAAGTACCACGAATCATTTGGACTACTGGACTTAATAAATTTGTTTAGTTGTATGACTGTGTACTAAGGTTGACATACCCTTATAAGTCAGGATTTGGATCCCTCACATGTTCTCTTCTCTTGATATAACATCCAAAGAACGTACC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00111	320069	323077	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006629 lipid metabolic process

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000111s00011082.1	PF01764.20	Lipase_3	54	204	9.40E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.851
SRR1783600	control	26.865
SRR1783602	moderate drought stress	22.254
SRR1811619	moderate drought stress	22.114

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	119.903
DRR006520	Root Summer glycyrrhizin high producing strain	119.005
DRR006521	Root Winter glycyrrhizin high producing strain	17.655
DRR006522	Root Winter glycyrrhizin high producing strain	17.139
DRR006523	Root Summer glycyrrhizin low producing strain	132.882
DRR006524	Root Summer glycyrrhizin low producing strain	134.718
DRR006525	Leaf Summer glycyrrhizin high producing strain	28.104
DRR006526	Leaf Summer glycyrrhizin high producing strain	27.968

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	83.571
SRR2868004	Drought Stress (root)	149.075
SRR2967015	Control (root)	151.771

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	96.085
SRR9715740	Leaf	110.191
SRR9715741	Leaf	121.416
SRR9715739	Root	90.446
SRR9715742	Root	151.503
SRR9715743	Root	134.075

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	174.023
SRR8749028	MeJA induced 9h	196.007
SRR8749029	MeJA induced 9h	189.722
SRR8749030	Uninduced	226.769
SRR8749031	Uninduced	143.229
SRR8749032	Uninduced	107.594

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	40.343
SRR8400027	Control - Root	93.639