Gene detail information of Glyur000111s00011078 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10770.1 | 3.00E-131 | Eukaryotic aspartyl protease family protein |
| NR | XP_003551807.1 | 0 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Glycine max] |
| Swissprot | tr|Q9LHE3|ASPG2_ARATH | 4.00E-67 | Protein ASPARTIC PROTEASE IN GUARD CELL 2 (Precursor) |
| trEMBL | tr|K7MQS3|K7MQS3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G10200.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00111 | 294971 | 300796 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000111s00011078.1 | PF14543.1 | TAXi_N | 160 | 326 | 3.70E-42 |
| Glyur000111s00011078.1 | PF14541.1 | TAXi_C | 347 | 495 | 5.70E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 333.046 |
| SRR1783600 | control | 334.484 |
| SRR1783602 | moderate drought stress | 187.556 |
| SRR1811619 | moderate drought stress | 188.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 500.040 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 495.846 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 43.434 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.872 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1000.079 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 992.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 523.148 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 519.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 275.425 |
| SRR2868004 | Drought Stress (root) | 510.214 |
| SRR2967015 | Control (root) | 403.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 109.971 |
| SRR9715740 | Leaf | 169.234 |
| SRR9715741 | Leaf | 72.771 |
| SRR9715739 | Root | 150.159 |
| SRR9715742 | Root | 153.392 |
| SRR9715743 | Root | 153.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.941 |
| SRR8749028 | MeJA induced 9h | 73.725 |
| SRR8749029 | MeJA induced 9h | 52.251 |
| SRR8749030 | Uninduced | 23.848 |
| SRR8749031 | Uninduced | 9.343 |
| SRR8749032 | Uninduced | 12.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 151.512 |
| SRR8400027 | Control - Root | 221.065 |