Gene detail information of Glyur000111s00011059 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007146509.1 | 2.29E-60 | hypothetical protein PHAVU_006G046800g [Phaseolus vulgaris] |
| trEMBL | tr|V7BN91|V7BN91_PHAVU | 9.00E-61 | Uncharacterized protein {ECO:0000313|EMBL:ESW18503.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00111 | 180122 | 180706 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000111s00011059.1 | PF14364.1 | DUF4408 | 29 | 51 | 2.30E-05 |
| Glyur000111s00011059.1 | PF05553.6 | DUF761 | 162 | 188 | 7.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.174 |
| SRR1783600 | control | 15.977 |
| SRR1783602 | moderate drought stress | 13.412 |
| SRR1811619 | moderate drought stress | 15.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.136 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.111 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.718 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.544 |
| SRR2868004 | Drought Stress (root) | 1.534 |
| SRR2967015 | Control (root) | 0.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.547 |
| SRR9715740 | Leaf | 26.761 |
| SRR9715741 | Leaf | 14.493 |
| SRR9715739 | Root | 8.378 |
| SRR9715742 | Root | 4.075 |
| SRR9715743 | Root | 6.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.274 |
| SRR8400027 | Control - Root | 0.410 |