Gene detail information of Glyur000111s00011045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27340.1 | 3.00E-48 | |
| NR | XP_004500092.1 | 3.45E-88 | PREDICTED: uncharacterized protein LOC101492988 [Cicer arietinum] |
| COG | YP_005029727.1 | 1.00E-31 | conserved protein of unknown function [Azospirillum brasilense Sp245] |
| trEMBL | tr|I1KYA3|I1KYA3_SOYBN | 1.00E-88 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G43110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00111 | 117489 | 120436 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000111s00011045.1 | PF06155.7 | DUF971 | 25 | 104 | 1.30E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.156 |
| SRR1783600 | control | 10.486 |
| SRR1783602 | moderate drought stress | 7.350 |
| SRR1811619 | moderate drought stress | 7.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.242 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.506 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.109 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.039 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.364 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.832 |
| SRR2868004 | Drought Stress (root) | 35.925 |
| SRR2967015 | Control (root) | 33.630 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.275 |
| SRR9715740 | Leaf | 16.170 |
| SRR9715741 | Leaf | 6.172 |
| SRR9715739 | Root | 4.876 |
| SRR9715742 | Root | 4.134 |
| SRR9715743 | Root | 4.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.024 |
| SRR8749028 | MeJA induced 9h | 41.532 |
| SRR8749029 | MeJA induced 9h | 56.088 |
| SRR8749030 | Uninduced | 72.275 |
| SRR8749031 | Uninduced | 81.597 |
| SRR8749032 | Uninduced | 53.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.615 |
| SRR8400027 | Control - Root | 26.263 |