Gene detail

Gene detail information of Glyur000111s00011034

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G39650.1	1.00E-74	Protein of unknown function (DUF506)
NR	XP_007139207.1	0	hypothetical protein PHAVU_008G010300g [Phaseolus vulgaris]
trEMBL	tr\|V7B425\|V7B425_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW11201.1}

Sequence

Transcript Sequence

>Glyur000111s00011034.1
GGGTTTTTTCCATTCGCAAAGGAAATCACTTTTCCATTTGCCANTCGTTCTTCCTTCTCCCCTTCTGGTTGGATCGATAAGGCCAATTTGTTTTTTAATTTTTGTTATCAGATTCTGAACAAAAAAGAAGCTCGCAAGCTAATTCACATTAAACACAGGAAAAAGAAAACAAAAAANTAAATTAAATAATTTTACATTTTTTATTATTTCCTCTATTAAAAAGTAGTCGTGGGAAACAAGAAAAAGATTTGAAATTTGAGCGAATTGGATCGTGTCTTCAATTGGGTCATCGAATTTGAGGTAGAGGAATCGTGGGTATTCAACGAATTTTGGTTTTGTTGTTGGGGGTGGTGTTGGGTTGCGGTGGTGGTGGTGGTGGTGGTGGGGTTTTTTTTATGAAACGGTGCCGTTTGGTTGTGTCAAGTGGTGGAGAGAAGCTGGGGACTTGGGGTGGTCGAAACGACGCCGTTATGGACTGCGAGGTTTGTGTCGACGCCGGCGGCGATTTGTGGGTCAGCATCGGCGGCGGCGGCGGCGGCCAGATCGGTGGTGGTTTTAGCCACGAGAGCGAACACGATTTGGCGATGATGGTTAGCGACTTCTTAGAGAACGGTAGCGTTGGCGCTGAGTCTTGGTGTAGCAGTGACAGCGANTCTGGTCTCTCTGATTTTGCTCACCTTGCTGAAAAGATTCAGATCTGTAAGCTATCGGTGGCTCAACACGAGAGTGACTTGCTCTCGGTTGTTCANTCTCTCATACGATCGATGAACGAGACTAACCTTCAAATTATGAATTCCGGTCCATGTAAAGCTAGCTGTATCANGTTTTATCTGGTGAAATTGATGAGACTCTCTGGCTATGATGCCGGTGTTTGTGCATCAAAATGGCACGGTAGTGGCAAGGTCCCCGGAGGTGATCATGAATACATTGATGTGGTGATAAACAATAATTCCGGAATCTTTGAGCGATTGATTGTCGATATCGATTTTCGAAGCCACTTTGAAATAGCTAAAGCTGTTGATTCATACGATAGGATACTGAATTCGCTTCCNGTTGTTTATGTGGGTTCCTTGACCAGGCTGAAACAATTTCTTGTAATAATGGAGGAAGCTACTNGATCATCTTTGAAACAAAACTCCATGCCTCTTCCTCCATGGAGATCTTTAGCATACTTGCAAGCAAAGTGGCAATCACCCTATGAAAGACATACACAATCAGAAGGCAACAACAATGATGATNCTAGCAATGGCGATTGCTTCGACCACAAGCAATGCCGGGGACATTTGAAGAGGCTGCAATCTTGTCTTCAGTCAGGAATGGAATTAGAGCGAATGTTGAAGCCGCGGAACAACGAAAGTAACCGGAGGATGAAGCCGGACAGATGGAGGCATGCCTTTTTCAGGCCTATTTGACAACATATACAGATTTTGGCTCTCAAGTTCTCAACAGAGTGAGTGAAAAAAAAATAAAAAACAATACATAATTTTGCGGCGGCTTTTATCTTATCTCCATGAAATCTTCCCCAAGCTACATAATAAGTCTGGTACACAAATGACAGGTTCATATAGGAATCCTTATCAGCCAGCAATAAGCCTTTTTTTTTTGTTATGCATCAGTTTCTTTGTTTTTTTTTGTCTN

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00111	16961	20724	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000111s00011034.1	PF04720.7	DUF506	69	270	1.50E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.205
SRR1783600	control	3.235
SRR1783602	moderate drought stress	6.963
SRR1811619	moderate drought stress	6.661

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.874
DRR006520	Root Summer glycyrrhizin high producing strain	11.725
DRR006521	Root Winter glycyrrhizin high producing strain	6.966
DRR006522	Root Winter glycyrrhizin high producing strain	7.131
DRR006523	Root Summer glycyrrhizin low producing strain	19.659
DRR006524	Root Summer glycyrrhizin low producing strain	19.733
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.061
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.856

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.006
SRR2868004	Drought Stress (root)	37.989
SRR2967015	Control (root)	33.224

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	47.374
SRR9715740	Leaf	37.970
SRR9715741	Leaf	63.134
SRR9715739	Root	14.080
SRR9715742	Root	59.347
SRR9715743	Root	51.549

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	33.161
SRR8749028	MeJA induced 9h	49.556
SRR8749029	MeJA induced 9h	29.953
SRR8749030	Uninduced	101.244
SRR8749031	Uninduced	84.656
SRR8749032	Uninduced	59.804

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.791
SRR8400027	Control - Root	25.560