Gene detail information of Glyur000110s00011798.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G40050.1 | 2.00E-20 | Protein of unknown function (DUF3550/UPF0682) |
| NR | KEH20788.1 | 6.91E-30 | signal transducer, putative [Medicago truncatula] |
| Swissprot | tr|P56725|ZOX_PHAVU | 1.00E-70 | Zeatin O-xylosyltransferase |
| trEMBL | tr|A0A072TV91|A0A072TV91_MEDTR | 3.00E-30 | Signal transducer, putative {ECO:0000313|EMBL:KEH20788.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00110 | 333458 | 340845 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13495 | CISZOG | EC:2.4.1.215 | Zeatin biosynthesis | map00908 |
| Zeatin biosynthesis | map00908 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000110s00011798.2 | PF00201.13 | UDPGT | 15 | 61 | 5.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.038 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.264 |
| SRR1811619 | moderate drought stress | 0.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.259 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.257 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.727 |
| SRR2868004 | Drought Stress (root) | 1.163 |
| SRR2967015 | Control (root) | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.056 |
| SRR9715740 | Leaf | 0.059 |
| SRR9715741 | Leaf | 0.761 |
| SRR9715739 | Root | 0.012 |
| SRR9715742 | Root | 0.023 |
| SRR9715743 | Root | 1.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.077 |
| SRR8749028 | MeJA induced 9h | 0.204 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.083 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.568 |
| SRR8400027 | Control - Root | 0.235 |