Gene detail information of Glyur000110s00011793 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41660.1 | 3.00E-58 | Protein of unknown function, DUF617 |
| NR | XP_003518131.1 | 6.66E-131 | PREDICTED: protein MIZU-KUSSEI 1-like [Glycine max] |
| Swissprot | tr|O22227|MIZ1_ARATH | 4.00E-81 | Protein MIZU-KUSSEI 1 |
| trEMBL | tr|I1L9Y9|I1L9Y9_SOYBN | 7.00E-131 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G13230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00110 | 310447 | 311361 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000110s00011793.1 | PF04759.8 | DUF617 | 132 | 303 | 9.00E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.130 |
| SRR1783600 | control | 2.670 |
| SRR1783602 | moderate drought stress | 7.092 |
| SRR1811619 | moderate drought stress | 7.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.189 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.318 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.691 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.208 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.518 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.855 |
| SRR2868004 | Drought Stress (root) | 46.510 |
| SRR2967015 | Control (root) | 33.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.753 |
| SRR9715740 | Leaf | 8.363 |
| SRR9715741 | Leaf | 12.877 |
| SRR9715739 | Root | 5.880 |
| SRR9715742 | Root | 49.640 |
| SRR9715743 | Root | 40.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.146 |
| SRR8749029 | MeJA induced 9h | 0.025 |
| SRR8749030 | Uninduced | 0.039 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.860 |
| SRR8400027 | Control - Root | 6.789 |