Gene detail

Gene detail information of Glyur000110s00011755.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G41890.1	0	curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein
NR	XP_003535168.1	0	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1-like [Glycine max]
COG	YP_001958461.1	1.00E-11	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|P93756\|SD31_ARATH	0	G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 (Precursor)
trEMBL	tr\|K7K9A9\|K7K9A9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G31410.2}

Sequence

Transcript Sequence

>Glyur000110s00011755.1
ATGCCTGAACAGGAGAATTTTCTCCTTAGGTCGCCACCATTCTTGCTTTGTGTCTTCATTGGGTTGTTGTTGATACATTCTGTTGTGAAAGCTGAGATGCCATTGGGTTCCAAACTTTCAGTGGTTGACAATGATTATTGGGTTTCCTCCANTGGTGATTTTGCATTTGGATTCTTCAACATTTCGGGTCAACCGAACCAGTTTAGTATCGGCATTCGTTTCAATTCGAAGTCTATACCATATAGCCAACAAACTGTGGTCTGGGTTGCTGGTGCTGATGTCATAGTTGGTAACATGTCCTATTTTGAACTCAACAAGGAAGGTGAATTGGTCCTGTTTGATCCCTTAAAAGAAGCGTCTGCTTGGACCACTAGAACAGGAAACCAATCTGTTGTTTCGGCTTCTCTTCTTGACAATGGGAATCTTGTTCTAATGGACAGAGAGAAGAACATCATTTGGCAAAGTTTTGGTACTCCATCGAATACGCTTCTCCCGGGCCAGAGTTTATCTGTCGATTCTTTCCTTCGAGCCGCGGCNAGGAACCACAAGGACAGTTATTATACTCTTCACATGAATGCTTCTGGTCATTTAGAGCTACACTGGGAGAGTGATGTTATCTACTNGACAAGTGAAGGTCCTTCCGCTTCGAATCTCAGCGCTTTTCTTACAACCAGTGGAGCCCTGGAGCTTCGAGACCAAAGTTTGAAACCTGTTTGGTCTGTGTTTGGAGATGACCACAATGATTNTGTGAGTTACAGATATCTTAGGCTCGACGTGGATGGCAATCTNCGGTTGTATTCGTGGGTCGAAACGTTACAATTATGGAGATCGGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTCAACTNGGTATCTGTATCTTCAACGACTCGGGTTCTGCCGAATGCAGATGTCCATTTGAGGCAGATGTGAGTAACAAATGTTTGGTTCCGTATGAGCAGCAGTGTGAATCCGGCTCCAGTATGATCGCATATAAGAACACTCATCTATATGGGNTCTATCCACCTGATGATTCTGTTGTCACAAGTAGTTTGCAGCAATGTGAACAATTGTGCCTGAAAGACTCACAATGTACAGTGGCAACCTTTTCCAATGATGGGAGTCCACAATGTTCCATAAAGAAAACTGAGTATGTCACTGGTTATGCAGATCCATCTGTAAGCTCAATATCATTTGTTAAGAGATGCTCGGGTCCATTCGCTGTAAATCCCAATCTCGCGAAATCTCCTCCTCCATCTGACCAACCTCCAAGGCTCTGTGTTCCTTGTCTAATAGGAGCTTCCACAGGCACATTTTTCATGTTTGTTATCCTCCAGTTGGGAATTGGGTTCTGCATCTGCAGAAGAAAACACTCTGCTAGGGAAAAAGCCACCTTAGCTCTCACATGCCCTAACTCGGAGGGTTTAACCGTGTTGTCCTTCTCGGAAATCAAGAGCCTCACAGGGGATTTCAAGAATCAAATCGGGCCAAAGATGTTCAAGGGTTCGCTACCAAACGATCACCTGGTCGCGGTTAAAGACCTTAACGCTTCCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTGTGAAGATGGGTAGCATTCACCACAAGAACCTTCTGAAGCTCGAGGGTTATTGCTGCGAGTTTGATCACAGGTTTTTGGTGTATGAATATGCCAAGAATGGTTCAGTGGACAAGTACATAGACGATCCTGCTCTTTGCAAGAAGCTAACTTGGAGAAAGCGAGTCGAAGTATGCTCGTGCGTGGCAAAGGCCATCTGTTATCTGCACTCCGGGTGTAGGGAGTTTATAAGCCATGGAAACTTGAAATGTGAAAATGTTACACTGGATGACAACTTAGAGGCCAAGGTGAGTGAGTTTGGGTTTGCTAGAGTAGATGGTAAGGCAACATATTGTGGCTTTTCTGCTGAGAAAGATGTAGAGGATTTTGGCAAGTTAGTCTTAACCTTGTTAACCGGGTGTCNCGACCGCGACCGCGAAAACATGGAGCTTTGTGAGTGGGCATATAAAGAATGGATGGAAGAGAGGGTAGGCAATGTGGTTGATAAAAGGGTGGAAGAGGGTTACAACTCAGAGGAACTAGAGCGTGCATTGAGGATTGCATTTTGGTGCCTTCAAAGGGATGAAAGGAGAAGACCTTCCATGGGAGAGGTAGTAAGAGTACTTGATGGTACACTAAATGTTGATCCACCACCACCTCCATTTGGCTTCCAAAGGATAGATGATTCAGAAGATGAAGAAGAGAATGTTTCAGAATCAGAAGTATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00110	61304	63607	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.Other

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0048544 recognition of pollen

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000110s00011755.1	PF01453.19	B_lectin	83	171	9.40E-21
Glyur000110s00011755.1	PF00954.15	S_locus_glycop	249	310	3.20E-11
Glyur000110s00011755.1	PF07714.12	Pkinase_Tyr	511	638	5.30E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.944
SRR1783600	control	4.911
SRR1783602	moderate drought stress	3.990
SRR1811619	moderate drought stress	3.928

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.117
DRR006520	Root Summer glycyrrhizin high producing strain	4.037
DRR006521	Root Winter glycyrrhizin high producing strain	1.171
DRR006522	Root Winter glycyrrhizin high producing strain	1.211
DRR006523	Root Summer glycyrrhizin low producing strain	2.987
DRR006524	Root Summer glycyrrhizin low producing strain	2.901
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.021
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.183

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.597
SRR2868004	Drought Stress (root)	4.992
SRR2967015	Control (root)	7.179

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.619
SRR9715740	Leaf	2.648
SRR9715741	Leaf	1.212
SRR9715739	Root	2.510
SRR9715742	Root	3.781
SRR9715743	Root	4.046

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.279
SRR8749028	MeJA induced 9h	1.702
SRR8749029	MeJA induced 9h	2.881
SRR8749030	Uninduced	0.729
SRR8749031	Uninduced	0.135
SRR8749032	Uninduced	0.482

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.834
SRR8400027	Control - Root	9.680