Gene detail

Gene detail information of Glyur000109s00010667.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G44830.1	0	Protein kinase superfamily protein
NR	XP_003551713.1	0	PREDICTED: protein kinase G11A-like [Glycine max]
COG	YP_593054.1	2.00E-16	serine/threonin protein kinase [Candidatus Koribacter versatilis Ellin345]
Swissprot	tr\|Q39183\|D6KL2_ARATH	0	Serine/threonine-protein kinase D6PKL2
trEMBL	tr\|I1N470\|I1N470_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G48670.1}

Sequence

Transcript Sequence

>Glyur000109s00010667.2
AGAGAATGTAGGGAGTTTTTGCNTTTTGACATTTCTCTATCTTGCAGGGTTTTCTTAACATGAAGTNTTTTGTTTGGTGATATGTAATATTGGGATATGGAGAGGGTTGCAGAGCCAAAGGCACTTCCTCGGACCTTGCCCATCCTAGTTGAGGTATCTAATGCACACGCAGCTGCAGCAAGAGAAGTTGATCAGAGACTAAATCGGGAAGATGTTTCAAGTGTGCGCGGGATTTCAGCAAGAGAAGTGAATCAGTTTTCAAGATCACGGGATGGCCATATGACACGTCTGGCCTCCATCAGAGAAGTGGCTCAGTTGTCAAATGCAAGGATAGTCTTGGTAAGAGAAGACATGGGATTCGATACGCGACCCTCTCAAGAACCGGTCTCGCCTGCACCTGCAAGGACATTGAAAGGAAAGGCCTCTTTGCCAGAACCCGAAGAACTTTTGACTGATATNGAGACATTGAAGAGCAGCAGTGATTCTTTTGGGGAAACCGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCACCAGAACCTGTTGATACTGATCTCATGAGAACGGTTTATGTGCCAATAGGTCAAAACAAATCCGAGGCTGGATGCTTAATGAAGAGCATGCCCTTGAAGGGTCCTTCCCTAGAAGATCTTTCAATNCGTATTCCCCCTAAGAAACCAAGCCTAGCTGTTGTTTCTCCCACAGAAAGTCTGNTTGAAGAATCAAGTGACATGGGGAACTTAGCCTCACCATTTTCAGGTGCTCGTGCATCTCAGAATACTGAGAACTCTCTCCTTCCCCCAGATTCTGAGGAGAGAGAATGTGTTTGGGATTCTTCTTTGCCTCCAAGTGGCAATGTCAGTCCACATAGTAGCATTGATAGTACTGGTGTTGCCAGAACAATGAGCATTGCTAATAGTTGTGCAAGTACATATCGGAGTGATGCAATCACTAGCGATGGCATGCTTAGTATAGACAGGAATTTCGATAGTATGAAAGGAAGTGTAAAGGGGGATTCACTCGAGAGTGCAAAAACTAGTGCTAGTCGAGCGAGTGATAGCAGTGGCCTGAGTGATGACAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAACCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCAATCCGAGCACGGGATGGGATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTGTATCTCTCAGAGCTGAGTGCAACTCGNTGTTATTTTGCGATGAAAGTTATGGACAAGGCATCCCTTGCAAGCAGAAAGAAGCTGACTAGGGCACAGACAGAAAGGGAGATATTGCAGTTGCTGGANCATCCATTTCTGCCTACGTTGTATACACATTTTGAGACCGACAGATTCTCCTGTTTGGTGATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGACAACGGCAACCAGGGAAACATTTCTCGGAGTATGCTGCACGCTTTTATGCAGCAGAGGTTCTTTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTTTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTNGACCTTTCTCTTAGATGTGCTGTTTCGCCTACCCTTATCAGATCCCATGACAGTGACCCCTCGAAACGGGCCGGTGGTGGTGCATTCTGTGTCCAGCCTGCTTGCATTGAGCCTTCAGCAGTATGCATCCAGCCTTCCTGTTTCATGCCTAAGCTTTTCCCTCAGAAAAACAAAAAGTCAAGGAAGCCTAAAGCCGAGCCTGGCTTTACATCTGGCACACTTCCAGAGCTTGTTGCCGAGCCTACAACAGCTCGGTCGATGTCCTTCGTTGGCACCCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATCTTCTTGCATGAGTTATTATATGGCAAAACCCCTTTCAAAGGGTCAGGAAACCGCGCCACACTGTTCAATGTAGTGGGTCAGCAGCTCAAGTTTCCTGAATCGCCGGCCACAAGTTATGCCAGCCGCGATCTAATCCGTGGCTTGCTGGTGAAGGAGCCGCAGCACCGTGTCGGGGTGAAGAGGGGTGCAACTGAGCTCAAACAGCACCCTTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTTCCAAGACCAATGGAAAGTGAGCTACCAGCCAAGTTTGAAGCAGTTGATACTGTTGGGGTTGGAAGCAATAATAATAGCAAGAGGGTGGTAGGTAATAATAATGACATGAAATCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAGTTTGGATTCCTCTCAGTCTGCTTTGTATTATTGTGTTTTCCATCATTATCAGTTAATTTTTATTTTTTACAAGAGATGCGCTGCATTTGTCATGCATTTCAGTTTAGTCACAAAATAGCAGAATTCCATTTCAATTTGGAAAATATAGTTTAGGGTAGGATGGATGCC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00109	336413	341855	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000109s00010667.2	PF00069.20	Pkinase	366	515	3.90E-33
Glyur000109s00010667.2	PF00069.20	Pkinase	594	699	1.30E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.191
SRR1783600	control	19.368
SRR1783602	moderate drought stress	47.236
SRR1811619	moderate drought stress	45.998

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	43.154
DRR006520	Root Summer glycyrrhizin high producing strain	43.697
DRR006521	Root Winter glycyrrhizin high producing strain	15.651
DRR006522	Root Winter glycyrrhizin high producing strain	14.491
DRR006523	Root Summer glycyrrhizin low producing strain	44.156
DRR006524	Root Summer glycyrrhizin low producing strain	42.654
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.020
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.305

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.349
SRR2868004	Drought Stress (root)	18.780
SRR2967015	Control (root)	20.987

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.013
SRR9715740	Leaf	7.415
SRR9715741	Leaf	9.070
SRR9715739	Root	34.724
SRR9715742	Root	47.397
SRR9715743	Root	44.696

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.908
SRR8749028	MeJA induced 9h	1.783
SRR8749029	MeJA induced 9h	2.380
SRR8749030	Uninduced	0.495
SRR8749031	Uninduced	0.173
SRR8749032	Uninduced	0.488

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.527
SRR8400027	Control - Root	27.200