Gene detail

Gene detail information of Glyur000109s00010663

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G60320.1	Protein of unknown function (DUF630 and DUF632)
NR	XP_004492935.1	PREDICTED: uncharacterized protein LOC101510124 [Cicer arietinum]
trEMBL	tr\|A0A072U2S3\|A0A072U2S3_MEDTR	BZIP transcription factor bZIP80 {ECO:0000313\|EMBL:KEH23438.1}

Sequence

Transcript Sequence

>Glyur000109s00010663.1
GGCGGTAACAGTCTTTGCATCTAGGCAAATAGTAACTCCAACGTCCTTTCCACATCGGTAGTTTTGAAATTTTGAAATAAAATAAACCGAAAATGATTACAGCATTGAAGCATTATTAAATCTCCATTCATAAACCATCATTGCTCTGTTTTATCACCAAACAACACCAGCGTTTCTTTCATTTAAAAAAAAAACAGTGTTTCTTAATAAAATTCGCCGAATACAAACAAAATAGAAAAAAATAAATTAAAAAGAGAGAAAGCAACTAAGAAATTGGCACTTGTTGGAGAGTAAAGTAAAATGCACGTCCCCAGCTCAAAAAATCAGACCACACACTCCAGTCCAGTTCCACACTCAACTCAACTCAAACCACTTTTTGGCACACCGCAACCTAAAAAACACTACCATGTGATGAGTACACTCCTTCCTTCACTTCCTCCTTCCTTCACTTAAAAAGAACACATCCACACCACCATTTGAAAAACCCACGCGCCACCGCTACCCGTTTGTCGGTTTGTTTTGGTCCAATGGGTTGCACGGCGTCGAAGCTGGAAAACGAGGACACGGTGCGGCGGTGCAAGGACCGGCGCCGCCTAATGAAGGAGGCGGTATACGCTCGCCACCACCTCGCCGCCGCACACTCCGACTACTGCCGTTCCCTCCGCATCACCGGCTCCGCCCTCTCCACCTTCGCCGACAAGGAACCCCTCTCAGTCTCCGACAACACCCCCGCCGTATTCCTCAACCCCGCCAAAACAACAACCACCCCCACCGCCGCAACCACAACCACCCATTACACCCACCCACCACAACAACCATTGTCACCGTCACCGCCTCCATCATTCAACCCTTCCCCTTCCCCCACCATGGCTAGCTCTAAGCTCCCCCACATCCTCTCCTCCTCCAGCATCGCCGCCTCCAACAACCACCAACAACAACAACCCCGCCGCCGCAAACCACCGCCACCGAAGCTCCCTCACATCCTCTCCGATTCGAGCCCTGCCTCCACCCCACGAAGCCAAACCTCCAACAACAACTTCGCTTCGAATTTCTTCCCCACAGCACACTCCACATACTCTTCCACCCCTTCTCAAACCTCTTCAGTTTGGAACTGGGAAAACTTCTACCCTCCTCCTCCACCACCACCCGGTTCCGATTACTACGACAGAGAACATGAAGAAGCACATGATGATGCCGCTTCCCAATTCTCTTTCAAATCCCGTTACACTGAAGATGTTTCTTATGCTGATTCCCGACAACAACATCACCAACACCAACACCAACACCAACAACACCAACAACACCAACAGCAACAACGTTATGATGTGGAAGGATTTGATTCTGAGAGATCCGAATACGATTATTTCAACGGGAAACTCGCAATGGTTCAGAATCAAAAGAATCGCGATGGTGTTCATCATCATCATCATTTAGAGGATAAGGATTACACTGAGACGGAGAGAGAGGAGGTTGAGTGTAGTGAGTGGGGTGACCATTACAGCACCACGTCATCTTCTGATGATGATGGTGATGGTGATGATGATGGGGTTGAAGGGGATGTTGAATCGAGGTCTGAGATTGGGACAAGGTCGAATTTTGGGTCTTCGATGGGAGCGGGTGCTGCGGCGAAGATGGGCTATGCGGCGGCGGGGAAATCGGAGGATGCGGCGTCGANGTCGACGGGGGAAGGTGTGATGGAGATGAAGATGGTGGTGAGACATAGGGATTTGAAAGAGATTGTGGATGCCATTAAGGAGAATTTTGATAAGGCTGCTGTGGCTGGGGATCAGGTTTCGGAGATGCTTGAGATCAGTAAGGCTCAGCTTGATCGAAGCTTCAGGCAATTGAGGAAAACTGTGTATCACTCGAGTAGCTTACTGAGCAACCTGAGCTCGACTTGGACTTCCAAACCGCCGTTGGCGGTTAAGTACAGGCTCGACACCGGTTTNCTGGATGAACCGGGCGGTCCGAAGAGTCTTTGCTCCACTCTGGAACGGCTTATGGCTTGGGAGAAGAAGCTCTACGAGGAAGTTAAGACCAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCAGCCCTGCAGAGTCAGGAATGCAAAGGAGAGGATGAAGCAAAGATATTCAAAACCAAGGCTTCCATAAATAGGCTGCAGTCACTAATAGTTGTTACATCGCAGGCCGTGTCTACCACCTCGACCGCCATTATTGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATGATGTACATGTGGAGGGCAATGCACCAGTACCATGAAATCCAAAGCAACATAGTGCAGCAAGTCCGTGGCCTGGTTAACAGATCTTCAGGTGTCTCAACTTCTGAGCTGCACAGGCAGGCAACTCGGGAACTTGAATCGGCTGTGTCGNCTTGGCACACCAGTTTCTGCCGCCTTATAAAATTTCAGCGGGATTTTATCCTGTCCTTACATGGCTGGTTTAAGCTTAGCCTCATTCCGGTTGATAATGTTAACATCAACAACAGCAGGGAACCTTCTGATGCATACATGTTTTTCGATGACTGGAAGCTTGCACTCGACCGTGTCCCGGACACAGTTGCATCTGAAGCCATCAAGAGCTTTATCAATGTTGTCCACGTGATATCTTCCAAGCAAGCCGAAGAGCTCAAGATCAAAAAGCGAACGGAGACCGCTTCCAAGGAGCTCGAGAAAAAGGCTTCATCGCTACGAAACCTAGAAAGGAAGTTTTACCACTCGTATTCTATGGTAGGCATTAGCCTTCCCGACACTGCACCCGATAACGGACAAGGCTTGGATGCGCGCGATCCGCTCGCCGAGAAAAAACTGGAGCTGGCAACCTCCCAAAGGCGCGTCGAAGACGAAATGCTGAGGCATTCAAAAGCTGTAGAGGTAACAAGAGCTATGACACTCAACAATCTACAGACAGGTTTGCCTGGAGTCTTTCAGGCATTGACCAGTTTTTCTTCCTTGTTCACTGAGGCTCTTGAGTCAGTGTGTACTCGTTCATATGCCATTAAGTAGGTAATTTATTTGTTCTCTGCATGGGATCTAAGTTCTTCATTNTAAGGGCTGGGATTTTTTTTGGCGGCAAGCTCTTATTGCTCTTACTATTTGGAGTCATATATTTTGAAATGTAAATATGAAGAATTTTGTGGTTCCACCTATTTTGATGGGAATGGGAAAGGGAATTTTCTTATTGTACAGGGAAATTTCTTGGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00109	302952	314142	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000109s00010663.1	PF04783.7	DUF630	1	59	1.80E-25
Glyur000109s00010663.1	PF04782.7	DUF632	400	706	2.00E-100

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	42.009
SRR1783600	control	43.245
SRR1783602	moderate drought stress	45.359
SRR1811619	moderate drought stress	45.464

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	59.028
DRR006520	Root Summer glycyrrhizin high producing strain	57.738
DRR006521	Root Winter glycyrrhizin high producing strain	16.396
DRR006522	Root Winter glycyrrhizin high producing strain	15.917
DRR006523	Root Summer glycyrrhizin low producing strain	52.103
DRR006524	Root Summer glycyrrhizin low producing strain	50.613
DRR006525	Leaf Summer glycyrrhizin high producing strain	37.997
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.498

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	33.785
SRR2868004	Drought Stress (root)	31.674
SRR2967015	Control (root)	41.410

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.710
SRR9715740	Leaf	16.763
SRR9715741	Leaf	19.266
SRR9715739	Root	22.245
SRR9715742	Root	43.276
SRR9715743	Root	40.269

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.235
SRR8749028	MeJA induced 9h	5.836
SRR8749029	MeJA induced 9h	3.208
SRR8749030	Uninduced	0.585
SRR8749031	Uninduced	0.100
SRR8749032	Uninduced	0.199

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.333
SRR8400027	Control - Root	37.892